Eublepharis macularius (Leopard gecko): 129327521
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Entry
129327521 CDS
T09084
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129327521 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129327521 (DDX5)
03009 Ribosome biogenesis [BR:
emc03009
]
129327521 (DDX5)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129327521 (DDX5)
Spliceosome [BR:
emc03041
]
Complex A
U1 snRNP components
U1 related factors
129327521 (DDX5)
Complex B
129327521 (DDX5)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
Pre-60S particles
Helicases
129327521 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
129327521
NCBI-ProteinID:
XP_054832235
UniProt:
A0AA97KUR7
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All DBs
Position
4:complement(12900436..12908470)
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AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGALGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRAMQEIEQYRASKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGYGAQGFGNGTAFGNNFG
AAGMQGGFRAGTPAYQNGYDQQYGNNMANMHGAMNQQQYAYPATGATPMIGYPMPANYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcggctttggtggccctcgttttggaggaagt
agagggggagcattaggtggaaagaagtttggaaaccctggcgaaaagcttacaaagaaa
aaatggaatttagatgagcttcccaaatttgagaagaacttctaccaggaacatcctgat
gtggcaaggcgtgctatgcaagagatagaacaatacagagcaagcaaagaaatcacagtt
aaaggccataactgtccaaagccagtcatgaacttttatgaagctaactttcctgcaaat
gttatggaggtgattcagagacagaactttactgaaccaactgctattcaggcacaaggt
tggcctgttgcattgagtggactggatatggttggtgtagcacaaacaggatcagggaaa
acactttcttatctgttgcctgccatagttcatataaatcatcagccattcctagagcga
ggagatgggcctatttgtctggtgctggcaccaactcgagaattggctcagcaagtgcag
caggtggctgcagaatacgggagagcctgccgtttgaagtctacttgtatttatggaggc
gctcccaagggaccacaaatacgcgacctggaaagaggtgtggaaatttgcattgcaaca
cctggaagactcatagattttttggaagctggaaagactaatctcaggagatgtacttac
cttgtccttgatgaagcagaccggatgcttgatatgggatttgaacctcagatccgaaaa
attgtggaacagattagacctgacagacagactctgatgtggagtgcaacatggcctaag
gaagtgaggcagcttgcagaggacttcttaaaagaatatgttcatatcaacattggcgca
ctggagctgagtgcaaaccacaacattctgcagatagtggatgtgtgtcacgatgtagag
aaggatgataagcttattcggttgatggaggaaattatgagtgagaaagaaaacaagaca
attgtgtttgtggagaccaaaagaagatgtgatgaccttactagaaagatgaggagagat
gggtggccggcaatgggtatccatggtgacaaaagtcagcaggagcgagactgggttcta
aatgaattcaaacacgggaaggctcctatcctgattgccacagatgttgcttccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagcaccaaaacaggcacagcatacacattc
tttacacctaataacattaagcaagtaagcgacctcatctctgtacttcgagaggctaat
caagcaatcaaccccaaattgctccagttggttgaagacagaggttcaggtcgttccaga
ggtgaccgacgtgacagatattcagcgggcaaaagaggtggatttggttttagagagagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagacttcggtgcaaaagctcag
aatggtggctatggtgctcaaggttttggtaatggaactgcttttggaaacaactttgga
gcagctggcatgcagggtggcttcagggctggcactccagcttaccagaatggctatgac
caacagtatggaaataacatggcaaacatgcacggtgcaatgaaccagcagcagtatgca
tacccggcaactggcgccacacccatgataggttatccaatgccagcaaattatacccaa
taa
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