Eublepharis macularius (Leopard gecko): 129327637
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Entry
129327637 CDS
T09084
Symbol
COL7A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129327637 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
DUF4992
DUF4249
ETF
fn3_2
DUF1194
DUF3388
Motif
Other DBs
NCBI-GeneID:
129327637
NCBI-ProteinID:
XP_054832361
UniProt:
A0AA97J7K2
LinkDB
All DBs
Position
4:120000173..120200069
Genome browser
AA seq
2516 aa
AA seq
DB search
MGPNAATRNETDGRMRGEMLFFAALHAMLFASAQVKAQKRERVICTNVYAADVVFLVDGS
SSIGRANFRMVQAFMEGLIVPFVNVVGENGVRFGLVQYSDDPRIEFTFSKYLNGTEVMNA
VRELSYKGGNTRTGAGLRYVADNFFGATQIRPSIPKICILITDGKSQDNVEQAVMKLKSQ
GVKVFAVGIKNADTKELTKVASTPTDDYFFFVSDFKILRTLLPLMSRKVCASTGGTLQTI
DTQAYSGPTNLVFVDQGTNMLRIRWTAAGGPVTGYKVQYVSLTGLGQPITAERQEISLSA
GETSAVLRGLRGETEYLVTVIAQYANSLGESVSGKGRTQILSGVTNFRVLEAGPSFLRLA
WAAGPSAIQGYRLTFMARGETQAEEMRLESSATSVLLSNLRPNTDYVITLYPIYPHQTIA
PSVITGQTLSLAGVQHLSARNISSQSMFLSWQGVNGATAYRVTWGVLSGQDIQSADVDSS
KNSYLVTGLQPNTEYLVTVAPIYGQLEGPKASIRKRTDIIQTLQTIAVGPTSIRLTWNII
PSARGYRLEWRKAIGADTPKTVSLSTHENSYTLTGLQPGTAYHITLYTLYDGKEVATPVT
ISETEVEPSVGSISDLRIAETLGNRVRMAWTGVPGATGYKIVLRNTQDGTEKSRQISGSQ
TTVDLGDLKEEIIYVVRVSALIGSREGSAVPFNIRLRPTLVSSVSNLRAVPAGLGRIRLV
WTPIPRVTAYKMVIINTQDGSEETKQIPGDRGFIELQDLKDGVRYLVQITTLMGSQESTP
ATITFQMEHPSVGSITNLKTTAAGPNQLRITWNGVAGATGYKVTWRLRDGQEISRILPAD
VNSYAIEGLKAGSVYVIGVSALVGSREGSQVTTTATTAPDQVGTVSSLKVLESRSNVVRV
TWVGVPGVTAYRVMWSRSDGGGENSKLVSGSANSFDILNLEGGVSYIVKVTALIGNREGD
PVSITVTTPSVPAQPVGNLHVTDTSEKRIQLSWSPAPGSTGYRLTWRLAGGGPEKSQLLP
AHINAYEIEDLQPGGRYEVHITSLTGSQESEAVAIVASTAPLGRVTNFRVSETQKDSVTL
TWSPVSGATNYLLTWKASRGGGDAQRTLPGSATSHRVSGLRLGERYTFTIRPVFGSITGA
ETSVTEQTVCHDAHSDIAFLIHATRDNAYNAEAMRSFLSNMVSALGQLGPSATQVGLLIY
SYRSLPLLLFNRSSDVATVLQHIHTLRYEEPSGNAIGAAINFAKNYIMSHSAGRRLGVPG
VLVILADGPSSDEAIEQAREIKAAGIHVLAVGMDGADREQLRRLVTNEDPRHVFFVRDSS
TLSELEEALASALCRAQITDGPRPEPCVVHCPKGEKGEPGEIGRKGRMGLPGPSGEPGRN
GIPGPPGPVGPRGPPGDVIGRLGEKGDMGFPGIDGMPGNPGRPGNPGSPGQPGSPGLSGL
KGNPGDRGLIGPVGPRGEKGEPGQPGVVSGGGGLPGRKGEPGNPGNPGSPGARGPVGDPG
SPGLRGPSGPPGPAGDFVKGDKGDRGERGPPGNGDGVVLRGEPGIPGVPGDPGPRGPPGL
PGQKGDKGDGEEGFPGPPGRPGDPGDRGPRGPQGEQGSKGDRGQPGEVGPSGEKGERGSP
GPEGEKGEQGPSGRSGPPGRDGLPGPPGSRGQRGEPGEPGTPASSISGIKGDKGERGPVG
PEGPPGSRGEPGSKGERGSPGLSLPGILGPKGEQGDRGVVGLTGKTGPKGDPGEPGERGE
PGRAGPPGPGGLRGKEGEKGDKGEEGILGEPGPPGKLGERGPRGLPGNRGLLGEKGDQGD
PGEDGRNGSPGAPGTKGERGDPGLPGPPGQTVSVGAGVGGQKGEKGDPGDPGEDGMKGVR
GETGLPGPAGERGIEGPRGPPGVRGDPGDRGPVGEKGDRGPPGLDGRNGIDGKPGQIGPA
GQRGDPGKQGDPGRDGLPGLRGEQGPLGALGLPGPTGLPGKPGDDGKPGLNGKNGEDGTP
GEDGRKGDKGEAGDPGRDGREGIKGERGSNGPPGPVGSPGVPGVPGQVGPPGQGMPGLPG
MSGQKGDRGETGSKGEQGRPGEPGPRGEPGTIPNVERALETYGIKISLLREITGAYDGSA
DQFLPVPDRLRGLKGNKGDPGERGPPGKEGVIGFPGERGSKGDKGEQGPSGPQGPIGRAI
GERGLEGPPGQPGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGEKGDRGEQGRDGLQGPP
GPPGPKIDTTEGILSGLPGERGPAGPKGSKGEPGEDGERGSRGDKGEAGQKGEKGDAGEK
GRDGSPGFPGERGLPGSEGKPGQQGFRGPSGPAGNQGEPGPSGPPGPIGPPGTQGPPGIK
GDAGQPGSSIRGLPGPQGNVGLPGPLGLPGLMGPPGPPGLPGQVGESGKPGVPGRDGVPG
KEGEPGLPGKMGMPGPLGSTGPXRRTWGCRVLWDLLEXKAKRENQEILMGNYWGSRVPKE
IEVYQAPEERRANLGIRGNLEILERMEPKDHLGXKEKRVHMGLAYKDLQGRLGLQA
NT seq
7551 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaacgctgcaacgcgaaacgaaacggatggccgaatgagaggggagatgctg
ttcttcgctgctctccatgccatgctttttgcttcagctcaagttaaggctcagaaaaga
gagagagtgatctgcaccaacgtctatgcagctgatgttgtctttctggtggatggatca
tccagcatcggaagggccaacttccgcatggtccaagccttcatggaggggctgattgtg
ccttttgtcaatgtggtgggggaaaatggggtgcgttttggacttgtgcagtacagtgat
gaccccaggattgagtttacattttccaagtacctcaatggaacagaggtgatgaatgct
gtcagagagctgagctacaagggcgggaacacacgcacaggtgcaggccttcgttatgta
gcagataatttctttggagccactcagatccggcccagtattccaaagatttgtatcctc
atcacagatggcaaatctcaggataatgttgagcaagcagtgatgaaactgaagagtcaa
ggtgttaaagtctttgctgtgggcatcaagaatgcagacaccaaagagctcaccaaggtg
gcctccacacccactgatgattacttcttctttgtctccgattttaaaatcctgagaact
ctgctacctctaatgtcacggaaggtgtgtgccagcacagggggcaccctacagacaata
gatacacaggcatacagtggccctacaaatctggtctttgtagaccaggggacaaacatg
ctgaggatccgctggactgctgctgggggtcccgtaacaggctataaagtccagtatgtg
tctctcacaggcttggggcaaccaataacagcagagaggcaggagattagtttgagtgct
ggtgagacaagtgctgtgctccgtggtttgagaggagagacggaatacctggtcaccgtt
attgctcagtatgccaacagccttggagaatcggtctctggcaaaggacgtactcagatc
ttgtctggagtgacaaactttcgagtgttggaagccggcccatcattccttagactggcc
tgggcagctggcccaagtgccatacagggctacaggctcacttttatggccagaggtgaa
actcaggctgaggaaatgaggttggagtctagtgctacatctgtcctgctcagcaacctt
cgccctaacactgactatgttatcacactctaccccatctatccacatcagacaatagcg
ccttctgtgattactggccaaacattgagtttggcaggagtgcaacatctgtctgctcgg
aacatttcctcccagagcatgtttctgtcttggcagggtgtgaatggagctactgcatat
cgtgtaacctggggagttctctcaggtcaggatattcagagtgctgatgtggattcaagc
aagaattcctacttagtgactggattgcaacctaacactgagtacctggtgactgttgct
ccaatttatggacagctggaaggacccaaagcctccattaggaagagaactgacataatt
cagacactgcagactatcgctgtaggtccaacgtctatccggttgacctggaacatcatc
cccagtgcccggggttatcggctagagtggagaaaagcaataggtgcggatacacctaag
actgtttccctatccacccatgagaacagttatactctgacaggcctgcagccaggaaca
gcatatcacataaccctctataccttgtatgatggcaaggaagtagccaccccagttacc
atttctgagactgaagtggagccatcagtgggcagcatctctgatttaagaatcgctgag
accttaggaaacagagtccgaatggcttggacaggtgttcctggggctacggggtataag
attgtgcttcgaaacacccaagatggcacagagaagagtcgacaaatttcaggttcccag
accacagtggacctgggtgatctgaaagaggaaatcatctatgttgtccgtgtgtcagct
cttattggcagccgtgagggtagtgctgttcctttcaacatccgacttcggccaacactt
gtaagcagcgtctcaaacctgcgtgcggtgccagctgggttgggtcgcattcgacttgtg
tggacacctatccccagggttacagcttataagatggtgattatcaacacccaagatggc
tctgaggagactaaacaaatccctggtgatcggggtttcattgaactgcaggatctgaag
gatggagtcagatacttggtgcaaataacaacgctgatgggcagccaggagagcacccct
gccactattacttttcaaatggaacacccatctgtgggcagcatcaccaacctaaagaca
actgcagctgggcccaaccagctgcggatcacatggaatggtgttgctggggctactggc
tataaggtgacatggcgactgagggatggtcaagagatctctcggatactgccagctgat
gtaaactcctacgctattgagggcttgaaggcggggtcagtctatgttattggagtctca
gccttggttggaagcagagaaggaagtcaggtcaccaccacggctacaacagcccctgat
caagtgggaactgtttccagtctcaaggtccttgagtccaggagcaatgtggtgcgagtc
acatgggttggtgtgcctggagttaccgcatacagagtgatgtggagccggagcgatggt
ggcggtgaaaacagcaaattggtctcaggaagcgccaattcctttgacatccttaacttg
gaaggaggagtaagctacatagttaaagtcacagcactgattggcaaccgtgaaggagat
cctgtgtctatcactgtcaccacaccaagtgttccagctcaaccagttgggaatctgcat
gtgactgacacatcagaaaagcgcatccagctatcatggagtccagcacctggtagcaca
ggctatcgactcacctggcggttagcaggtggtggaccagagaagagccagctgctgcca
gcccacatcaatgcctatgaaattgaagacttacagccaggaggacgttatgaagtccac
atcaccagcttgacgggcagtcaggagagtgaagctgtggctattgttgccagcactgca
cctttgggccgtgtgactaattttcgggtgtcagagactcaaaaagattctgtgactttg
acgtggagtccagtttctggtgccactaattaccttctgacatggaaggcttcaagaggt
ggaggagatgcacaaagaacactgcctggatcagcaacgtcacaccgagtgtctgggtta
cggctgggtgagagatacacctttaccattcgcccagtttttggcagcatcacaggggct
gagacttcagttactgagcagacagtttgccacgatgcccacagtgatatagcttttctc
atacatgcgactcgagacaatgcctacaatgcagaggctatgcggagcttcctctccaat
atggtatctgctctgggacaactgggtcctagtgccactcaggtgggtcttctcatttac
agctaccgcagccttccattactcctgttcaatcgctctagtgatgttgcaacagtcctg
caacacatccacacactgcgctatgaggagcctagtggcaatgctattggagctgccatc
aattttgccaagaactatatcatgagtcacagtgcaggccgtagacttggtgtgccagga
gttctggtaatattggcagatggaccatcaagtgatgaagccattgagcaggccagggag
ataaaggcagcagggattcacgtacttgcagtgggcatggatggggctgatcgtgagcag
ttgcgccgtctggtaaccaatgaagacccacgccatgttttttttgtgagggactcaagc
actctgtcggagctggaagaggcgcttgccagtgccctctgtcgggctcaaatcacagat
gggcctagaccagaaccttgtgtagtgcactgtcccaagggtgaaaagggggaacctggt
gagattgggcggaaaggacgcatgggacttcctggcccttctggagagccgggacgcaat
gggatcccaggccctccaggaccagtgggacctcggggtccaccaggtgatgtcattgga
aggctgggtgagaagggagacatgggatttccaggaatagatggtatgccagggaatcct
ggccgtcctggtaatcctggttctcctggccaaccaggcagccctggcctttctggtctc
aagggaaaccctggggatcgtggcctaattggtccagtgggaccaaggggagagaaaggt
gagccggggcagcctggagtggtaagcggaggaggtggacttcctggccggaagggagaa
cctggcaacccgggaaatcctggaagtcctggagccaggggaccagttggtgatcctgga
tctcctggacttcgtggaccttctgggccaccaggacctgctggtgattttgttaaggga
gataagggcgaccgaggtgaacgaggccctccgggaaatggtgatggagtagtactcaga
ggagaaccaggtatcccaggtgtacctggtgatcctggacccagaggacctcctgggctt
ccaggacagaagggagacaagggggatggagaagaaggttttcctggaccacctggccgc
ccaggagacccaggagatcggggccctagaggacctcaaggtgaacaaggaagcaaggga
gaccgtggacagcctggtgaggttggaccatcaggagagaagggagaacgtggatcacct
ggccctgaaggcgagaagggagagcaaggaccttcaggccgttctggtcctcctggtaga
gatggcttgccaggaccacctggttcccgaggacaaaggggagagcctggtgaacctgga
actccagcttccagcatctctggaattaaaggggacaagggggagagaggtcctgtcgga
ccagagggaccacctggatccagaggagagcctggaagcaaaggagaacgtgggtctcct
ggattaagtctccctggcatacttggaccaaaaggagaacaaggggacagaggggttgtt
ggcctcactggaaaaactggaccaaagggtgaccctggagaaccaggtgagagaggagag
ccagggagagcagggcctcctggaccaggtggcctgcgagggaaagagggtgaaaaaggt
gacaaaggtgaagaagggatcttgggtgagccaggtccacctggcaaacttggagaaaga
ggtccaaggggtctgccaggaaaccgagggctccttggtgagaagggggaccagggggat
cctggtgaagatggaagaaatggtagccctggagctccaggcactaagggtgaacgaggg
gatccggggctgccaggaccaccaggccagacagtcagtgtaggagctggagtaggagga
cagaaaggcgagaagggagacccaggagaccctggagaggatgggatgaaaggcgtaaga
ggagaaactgggttacctggcccagctggagaacggggaattgaaggtcctagaggtccc
cctggtgttcgtggtgaccctggagatcgaggccctgtgggagaaaagggtgatcgaggt
cctccaggactggatggtcggaatggaatagatggaaagcctgggcaaattgggcctgca
ggacaaaggggtgacccaggaaaacagggtgacccaggcagagatggacttcctggtctg
cgtggtgaacagggtcctcttggagcactcggcctgccagggcctacagggttgcctgga
aagcctggtgatgatggcaaacctggactgaatgggaaaaatggtgaagatggaacacca
ggagaagatggcaggaagggggataaaggtgaagctggagaccctggcagagatggtcgg
gaaggtattaaaggagaacgagggagcaatgggcccccagggcctgtaggatcaccaggt
gttcctggtgtgcctggtcaagtgggtccaccaggccagggcatgcccggtctccctgga
atgtcaggacaaaagggggatagaggggagactggatccaaaggagagcaggggagacct
ggagagcctggaccacgaggtgaacctgggaccataccaaatgttgaacgtgccctggaa
acctatggtattaagatttccttattgcgagagatcacaggtgcctatgatgggagtgct
gatcaattcttgcctgtccctgatcgcctaaggggcctgaaaggtaacaaaggagatcca
ggagaaagggggccaccaggcaaagagggtgtcattggatttcctggagagagagggtca
aaaggagataaaggagaacaaggtccatccggtccacaaggtccaataggacgagccatt
ggagagcgaggactagaagggccacctggtcaaccaggagagcctgggaaacctgggatt
ccaggggtaccaggacgggctggagaacttggagaagctgggagacctggagaaaagggt
gatcggggtgagaaaggtgatcgaggagagcagggtagagatggcttacaaggccctcca
gggcccccagggcccaagatagatacaacagaggggatcctctcagggcttccaggagaa
cgaggacctgcaggacctaagggaagcaagggagaaccaggagaagatggcgagagaggc
tctagaggcgataagggtgaagcaggacagaaaggagagaaaggagacgctggtgaaaaa
ggcagagatggcagtcctggctttccaggagaaagaggtcttcctggttcagaagggaaa
ccgggacaacaaggttttagagggccatctggcccagctggtaatcaaggagaacctgga
ccctcaggccctcctggtcctattggtcctccaggaactcaaggtccaccaggaataaag
ggagacgcaggacaacctggttctagcatcagggggcttccaggtccccaagggaatgtt
ggactcccgggaccactaggtctgcctggccttatgggacctccagggcctccaggatta
ccaggacaagtgggtgaatcagggaagccaggtgtaccagggagagatggagtcccaggg
aaagaaggggaacctggacttccagggaaaatgggtatgccaggacctctgggatctact
ggtcctnaaaggagaacctggggatgcagggtgttgtgggacctcctggagtgaaaggcg
aaaagggagaaccaggagattttgatggggaactattggggaagccgggttccaaaggag
atagaggtctaccaggccccagaggagagaagggcgaacctggggatcagggggaacctg
gagatcctggagaggatggagccaaaggatcacctgggatgaaaggagaaaagggttcac
atggggttggcatacaaggacctccagggcagactgggccttcaggcttga
DBGET
integrated database retrieval system
