Eublepharis macularius (Leopard gecko): 129328658
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Entry
129328658 CDS
T09084
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129328658 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emc03036
]
129328658 (MBD4)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129328658 (MBD4)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
129328658 (MBD4)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129328658 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
GerE
Motif
Other DBs
NCBI-GeneID:
129328658
NCBI-ProteinID:
XP_054833843
UniProt:
A0AA97J9C5
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All DBs
Position
4:127824256..127837639
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AA seq
539 aa
AA seq
DB search
MSVPEASEDSGVRKTQMTKDVNKEQGQLLTVAGEYVGLKKEDTESLAESPVPCKEDGVTI
SLADSKAIPEGWEKIIKQRKTGKTAGKYDICFISPQGMKFQSKRALSDYFKKNDEMVLKS
EDFDFNAPVQKEAQSRTKGSSIMESEIQIYNSNSQVSDLGLQNSNKGHATFLQNEFLELQ
TNARELETISVCLQEGPSKDNSKHCFLKAKETTILDDGQNKKERKLSHKKQGMGCIKKSR
QKNGICAINSESVSDQKVCKIGSRRKKIHMKDEMLISEPTVEVHINPVAAVLECKSGSEI
LQCGENPIKIVTATTNKTPSEPEKLENWMPSESEEIKFASKMDIDVSQTCDEQHFTSLKE
GRVRRTRVERRKTSPYFSSRFLKEAPSPPRRKAFRKWTPPRSPFNLIQETLFHDPWKLLI
ATIFLNKTSGKMAIPVLWEFLKKYPSPRVARAANCKEMSELLKPLGLYELRAKTILKFSD
EYLTKQWKYPIELHGIGKYGNDSYRMFCVNEWKEVQPQDHKLNVYHAWLWENHEKLNLN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgccggaagcatcggaggacagtggcgtacgcaaaacacaaatgaccaaagat
gtaaacaaagaacagggtcagcttctgacagtagcaggagaatatgttggcctcaagaaa
gaagatacggagagcctggctgaaagtccagttccgtgcaaagaggatggagtgactatc
tctttagcagactcaaaagctatcccagaaggatgggagaagataataaagcaaagaaag
acaggcaaaactgcaggaaaatatgacatttgctttatcagtcctcaaggaatgaagttc
caatccaaacgcgctctttcagattactttaaaaagaatgatgaaatggttcttaaatca
gaggattttgattttaatgctcctgttcagaaagaggcacaatccagaaccaaaggatca
agtattatggagtctgaaatacagatctataactcaaatagccaggtttctgatcttgga
ttgcaaaatagtaataaaggacatgcaacttttctgcaaaatgaatttttggaactacag
actaatgccagggagttggaaacgatttctgtctgtttgcaggaagggccctcaaaagat
aactcaaagcactgttttttaaaggccaaagaaacaacaattttggatgatggccaaaac
aaaaaagaaagaaaactttcacataaaaaacaaggaatggggtgtattaaaaaaagtaga
caaaagaatggcatttgtgctataaatagtgagagtgtaagtgatcagaaagtgtgcaaa
ataggttcaagaagaaagaaaatacacatgaaggatgaaatgctgatttctgaaccaaca
gtggaggtgcatattaatcctgttgcggcggtcttggaatgcaagtcaggctcagaaatt
ttacaatgtggtgagaatcccatcaagattgttactgcaacaactaataagactccttca
gaacctgaaaaactggaaaattggatgccctcagagagtgaagagataaagtttgcttcc
aagatggatattgatgtttcacagacctgtgatgaacaacactttacatcactaaaagag
ggccgtgttcgaagaactcgagtggagagaaggaaaactagtccatatttttccagcaga
ttcctaaaagaagctccaagccccccaagaaggaaggcttttaggaaatggactccgcct
cgttctccttttaatttgatccaggaaacactctttcatgatccgtggaagctcctaatc
gccaccatatttctgaataagacttcaggtaagatggccatccctgttctttgggaattt
ttgaagaaatatccttcgcctagagtagcaagagctgccaactgcaaagaaatgtcagag
ctgcttaaacctcttggtctatatgaactcagagcaaagacaattctcaaattttcagat
gagtatttgaccaaacaatggaagtatcctattgagttgcatgggattggaaaatacgga
aatgattcttacaggatgttctgtgtcaatgaatggaaggaggtacagccacaagaccat
aaactgaatgtctatcatgcttggctttgggaaaaccatgagaaactgaatcttaattaa
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