Eublepharis macularius (Leopard gecko): 129328971
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Entry
129328971 CDS
T09084
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129328971 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
emc01007
]
129328971 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emc03016
]
129328971 (VARS1)
Enzymes [BR:
emc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
129328971 (VARS1)
Amino acid related enzymes [BR:
emc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129328971 (VARS1)
Transfer RNA biogenesis [BR:
emc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129328971 (VARS1)
Prokaryotic type
129328971 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
GST_C_2
Arc1p_N_like
Val_tRNA-synt_C
GST_C_3
tRNA-synt_1e
GST_N_5
Motif
Other DBs
NCBI-GeneID:
129328971
NCBI-ProteinID:
XP_054834298
UniProt:
A0AA97JB60
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All DBs
Position
4:159783668..159812005
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AA seq
1271 aa
AA seq
DB search
MPTVYLSPHPDNFQNLRVLVAACYGRQEPKVVELPPDRELGSPSFSLPKLPALETQAGVY
VSGPAAVSYLLSPDNMRGQGPNASALIRQWISYADLEIAPVACTAAFSVLGISKQSKQVS
DRALVELRKLLEVLDSHLKLRTYLVGEALTLADVTVACSLLLPYKYVLDLGLRTHYTNVT
RWFLTCVNQPEFKAVLGPLKLCGQPLGGGDLALELKDPASCPRAELLEQRPLTEPPPKSA
SQLKKEAKKKEKLEKFQQKKEKSQQQQQGEKKPKAEKKEKKDLGVITYDIPTNPGDKKDV
TSPMPDSYSPQYVEAAWYQWWESQGFFKPEYGRCSISEPNPKGLFMMCIPPPNVTGSLHL
GHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKEQGKTRHDLGREAF
IEAVWRWKNEKGDRINHQLKKLGASMDWDRACFTMDPKLSYAVQEAFIRLHEEGVIYRSK
RLVNWSCTLNSAISDIEVDKKELAGRTLLPVPGYKEKVEFGVLVSFAYKTQDSDDEVVVA
TTRIETMLGDTAVAVHPQDPRYRHLHGRSVLHPFTGQLLPIVCDDFVDMEFGTGAVKITP
AHDPNDYEVGLRHGLDFITIIDENGYLVNVPPPFLGMKRFDARRAVLEALKEKGHFREVK
DNPMVVPVCSRSKDVVEPLLKPQWYVRCDTMARGAAEAVRRGDLRIVPDFHLKTWFNWMD
NIRDWCISRQLWWGHRIPAYFVTIDDPSVPPGEDTDGKYWVSGRSEQEAKEKAAKAFKVT
TDKISLRQDEDVLDTWFSSGLFPFSIFGWPNPSEDLQVFYPGTLLETGHDILFFWVARMV
MLGLKLTGKLPFREVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGITLEGLHAQLLDSNL
DPAETERAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLW
NATKFAIRGLGDGFQPQPRPEPSGMESLVDLWILSRLSHAVELCGSGFQAYDFPGITTAI
YNFWLYELCDVYLECLKPVFAGPDEAAIQTARNVLYTCLDAGLRLLSPFMPFVTEELFQR
LPRRSTSSNPPSICVTSYPTTEQYCWRNEDLDHTVDFMLSIVRAVRSLRADYNLTKTKAD
CYLQCLDSETAAAVACCSEYIRTLSSSKQVLVLEPTQVPPPGCAVAIASDRCTVHLLLKG
LIDAEKEVSKLAGKKTELQKQILRLRERMDSPDYATKVPPKIQEADAAKLKQSETELQKA
EEAIENFKMMI
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgtctatctttccccgcatcccgataactttcagaatctccgtgtgcttgtt
gctgcctgttatggccgacaggagcccaaggtggttgaactgcctcccgacagagagttg
gggagtccttccttctctctgcccaaactcccagctctggaaacccaggcaggcgtctat
gtgtctggcccagcagccgtttcttacctgctgtccccagataacatgagagggcaaggc
ccaaatgcaagtgctttgatacggcagtggatcagttatgcggatttagaaattgcccct
gtagcttgcacggctgccttctctgttctggggatctccaagcagagtaaacaggtgtcg
gatcgtgctctggtggaactccggaagctgcttgaggtgctggatagtcatttgaagttg
cggacatacctggttggggaggccctgactttggcagatgtgacagtggcttgctctctg
ctgttgccgtataaatacgtcctagaccttggccttcgcacgcactacaccaacgtcacc
cggtggttcctgacatgtgtcaatcagccagagtttaaagctgtccttggtcccttgaag
ctgtgtggccagccactgggtgggggggatctggcactggagctgaaagatcctgcatca
tgtcccagggcagaactgttagagcagaggccgctaacagagccgccacccaaaagtgca
tctcagctgaagaaggaggccaagaagaaagagaaactggagaagtttcagcagaagaag
gaaaagagccagcagcaacagcaaggggagaagaagccaaaagctgaaaagaaggagaag
aaggatcttggagtgataacctatgacatcccaaccaatcctggggacaaaaaagatgtc
accagcccaatgcctgactcctacagcccgcagtatgttgaagctgcctggtaccagtgg
tgggagagccagggttttttcaaaccagagtatgggcgttgcagcatctctgagccaaac
cccaaaggcctcttcatgatgtgtatccctccacccaacgtcacgggatctctgcatctt
gggcacgctctcaccaatgccatccaagactccctcactcgatggcaccggatgcgaggg
gagaccaccttgtggaaccctggctgtgaccacgcgggcattgccactcaggtggtggtg
gagaagaagctttggaaggagcagggcaagacgcggcatgaccttgggcgcgaggcattc
atcgaggcagtctggaggtggaaaaatgaaaaaggtgatcggatcaaccaccagctgaag
aagcttggcgcctcgatggactgggatagagcttgtttcactatggacccgaaactctct
tatgctgtccaagaggcttttatccggcttcacgaggaaggggttatctaccgaagcaaa
cgtctcgtcaattggtcctgcaccctcaactcagccatctctgacatagaggtggataag
aaggagctggcaggccgaacgctcctgcccgtccccggctacaaagagaaggttgaattt
ggggtgctggtttccttcgcttacaagactcaggactcagatgatgaagtggtggtggct
acaacccgtattgagaccatgctgggggataccgcagttgcagtccatccccaggatccc
cgctatcggcatctgcacggccggagtgtccttcacccctttactggacagctcttgcct
attgtttgtgatgactttgtggacatggaatttggaactggtgcagtgaagatcacccca
gcccatgatccgaacgactacgaggtcggcttgcgtcatgggcttgacttcatcaccatc
atcgatgagaatggctatcttgtcaacgtgcctcctcctttcttgggcatgaaacgcttt
gatgctcgtcgagcagtgttggaagctctgaaggaaaaggggcattttagggaggtgaag
gacaaccccatggtagtacctgtctgcagccgctccaaagatgtggttgagccgcttctg
aagcctcagtggtatgtgcgctgtgacacaatggcccggggggctgccgaggcagtgcgt
cgaggggatttgcgcattgtgccagatttccacctcaaaacctggtttaattggatggac
aacatcagggattggtgcatttctcgacagctgtggtggggacatcgtatcccagcatat
tttgtgactattgatgatccctcagtccctccaggggaggataccgatggcaagtactgg
gtgagcggcagaagtgaacaagaagcaaaagagaaagctgccaaagccttcaaggtgacc
acagataagatctcactccggcaagatgaggatgtccttgacacctggttctcctctggg
ctgttcccgttctccatctttggatggccaaaccctagtgaagatcttcaggttttttac
cctggcactctcctggagaccgggcatgatatcctcttcttctgggtggcccgcatggtc
atgttgggcctcaagcttactgggaagctgcccttcagagaagtttatcttcacgctgtt
gtcagagatgcccacggcaggaagatgagcaaatcactgggaaatgtcatagatccattg
gatgtgataactggcattacactggagggattgcatgctcaactgctagatagcaatttg
gaccccgctgagacagagcgagcaaaacaaggacagaaatctgattaccccaatgggatt
ccagaatgtggcactgatgcccttcggtttgctctctgtgcatacacctctcaaggccgg
gacataaacctggatgtgaaccggatcttgggctatcgccatttctgcaacaagctgtgg
aatgccaccaagtttgccatccgtggccttggggacggattccaaccacagcctaggcca
gagcccagtggcatggagagtctcgttgacctgtggatcctgagtcgcctgagccatgct
gtggagttatgtggtagtgggttccaggcctatgacttccccggcatcaccacagcaata
tataacttctggctctatgagctttgtgatgtctacttggaatgcctaaagcctgtgttt
gctggccctgatgaagctgcaatccagacagcccggaatgttctctacacctgtttggat
gctggtcttcgtcttcttagccctttcatgcctttcgtcacagaggaactgttccagcgg
ctgcctcgacggtcaacttcctccaacccccccagcatctgtgtcacctcttaccccacc
acggagcagtactgctggaggaatgaggacttagaccacaccgttgacttcatgctgagc
attgttagggctgtgcgttccctcagagcagattataacctcaccaagaccaaagctgac
tgttacttgcagtgcctggactcggaaacagcagcggctgttgcttgctgctctgaatac
atccgcaccctctcctcttccaagcaagtgctggttcttgagcccacacaagtaccccct
cctggctgcgcagtagccatcgcctccgacagatgcaccgtccaccttctgctcaagggc
ttgattgatgctgagaaggaggtctccaaactggcaggcaaaaaaactgagctacagaag
caaatcttgcgcttacgggagcgcatggacagtccggactacgccactaaggtgccgccc
aaaatccaggaggcagatgctgccaagttgaaacaaagtgagactgaattgcagaaggca
gaagaagccatcgaaaatttcaagatgatgatctga
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integrated database retrieval system
