KEGG   Eublepharis macularius (Leopard gecko): 129329330
Entry
129329330         CDS       T09084                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03013  Nucleocytoplasmic transport
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129329330
  09122 Translation
   03013 Nucleocytoplasmic transport
    129329330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:emc03019]
    129329330
   03041 Spliceosome [BR:emc03041]
    129329330
Messenger RNA biogenesis [BR:emc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129329330
Spliceosome [BR:emc03041]
 Complex C
  Other components
   EJC/TREX
    129329330
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129329330
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd DSE1_N TRM82_WD Beta-prop_WDR35_TULP_N PD40 B-prop_COPA_B_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_HPS5 eIF2A Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_TEP1_2nd PAC11 Tricorn_2nd Beta-prop_EML Beta-prop_Vps41 WD40_RFWD3 RMC1_N Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_NOL10_N Me-amine-dh_H Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 129329330
NCBI-ProteinID: XP_054834820
UniProt: A0AA97JAI1
LinkDB
Position
4:154492919..154493485
AA seq 188 aa
MVLSPYILAMQELFRANTHSREFPTHGAKVHSVAWSCCGHHLASGSFDKTASVFVLEKDC
LVKENNYRGHGDSVDRLCWHPSNPDLFVTASGDKIIHIWDVCTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFTDAKTHWSKAEEQFRFEMNEISWNNDNNMFFLTNGNGCINI
LSYPELKP
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtgctttccccatacatattggccatgcaggaattatttcgggccaacacgcacagc
cgcgaattccccacacatggggcgaaggtgcactcggtggcctggagctgctgtggccac
cacttggcttcgggctccttcgacaagacggccagcgtcttcgtgctcgaaaaggactgc
ctggtaaaggagaataactaccgtggccatggagacagtgtggatcggttatgctggcac
cctagtaacccagatttatttgtcactgcatctggagacaaaatcatccatatatgggat
gtctgcaccactaagtgcattgccactgtgaacaccaaaggggagaacataaatatttgc
tggagccctgatgggcagactattgcagtagggaacaaggatgatgtggtcaccttcact
gatgcaaaaacacattggtccaaagctgaggagcagttcaggtttgagatgaacgagatc
tcctggaacaatgacaacaacatgtttttcctcaccaatggcaatggctgcatcaacatc
ctcagctatccagagctgaaaccttaa

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