Eublepharis macularius (Leopard gecko): 129329330
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Entry
129329330 CDS
T09084
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129329330
09122 Translation
03013 Nucleocytoplasmic transport
129329330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129329330
03041 Spliceosome [BR:
emc03041
]
129329330
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129329330
Spliceosome [BR:
emc03041
]
Complex C
Other components
EJC/TREX
129329330
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129329330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
DSE1_N
TRM82_WD
Beta-prop_WDR35_TULP_N
PD40
B-prop_COPA_B_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
eIF2A
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
PAC11
Tricorn_2nd
Beta-prop_EML
Beta-prop_Vps41
WD40_RFWD3
RMC1_N
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Me-amine-dh_H
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
129329330
NCBI-ProteinID:
XP_054834820
UniProt:
A0AA97JAI1
LinkDB
All DBs
Position
4:154492919..154493485
Genome browser
AA seq
188 aa
AA seq
DB search
MVLSPYILAMQELFRANTHSREFPTHGAKVHSVAWSCCGHHLASGSFDKTASVFVLEKDC
LVKENNYRGHGDSVDRLCWHPSNPDLFVTASGDKIIHIWDVCTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFTDAKTHWSKAEEQFRFEMNEISWNNDNNMFFLTNGNGCINI
LSYPELKP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttccccatacatattggccatgcaggaattatttcgggccaacacgcacagc
cgcgaattccccacacatggggcgaaggtgcactcggtggcctggagctgctgtggccac
cacttggcttcgggctccttcgacaagacggccagcgtcttcgtgctcgaaaaggactgc
ctggtaaaggagaataactaccgtggccatggagacagtgtggatcggttatgctggcac
cctagtaacccagatttatttgtcactgcatctggagacaaaatcatccatatatgggat
gtctgcaccactaagtgcattgccactgtgaacaccaaaggggagaacataaatatttgc
tggagccctgatgggcagactattgcagtagggaacaaggatgatgtggtcaccttcact
gatgcaaaaacacattggtccaaagctgaggagcagttcaggtttgagatgaacgagatc
tcctggaacaatgacaacaacatgtttttcctcaccaatggcaatggctgcatcaacatc
ctcagctatccagagctgaaaccttaa
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