KEGG   Eublepharis macularius (Leopard gecko): 129329991
Entry
129329991         CDS       T09084                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03020  RNA polymerase
emc03420  Nucleotide excision repair
emc04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129329991 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129329991 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    129329991 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emc03021]
    129329991 (POLR2E)
   03400 DNA repair and recombination proteins [BR:emc03400]
    129329991 (POLR2E)
Transcription machinery [BR:emc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129329991 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     129329991 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     129329991 (POLR2E)
DNA repair and recombination proteins [BR:emc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129329991 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C DUF7890 NA-iREase1
Other DBs
NCBI-GeneID: 129329991
NCBI-ProteinID: XP_054835774
UniProt: A0AA97KYK0
LinkDB
Position
5:complement(5533132..5544459)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctgtggaagatccggaaaacgataatgcagctt
tgccatgatcgaggctacctggtgacgcaggatgagttggaccagaccctggatgagttc
aaagctcagtttggggataagcccagtgaggggaggccacggcggacagacctcaccgtg
ctggtggcccacaacgatgaccccacggatcagatgtttgtgttcttcccagaggaaccc
aaagttgggattaagactatcaagatgtactgccagcgaatgcaggaggaaaacatcacc
cgggccctcattgttgtacagcaaggcatgactccatcagcaaaacagtctcttgtggac
atggctcccaagtacatccttgaacagtttcttcagcaggagctgctgatcaacatcacc
gaacacgagttggttcctgaacacgtggtcatgaccaaggaagaagtgacagagttactt
gccagatataagctaagggagaaccagcttccccggatccaggccggcgacccagtggcc
aggtactttggaatcaagcgcggacaggtggtcaagatcatccgtcccagtgaaactgct
ggccgatacattacctaccggctggtgcagtaa

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