Eublepharis macularius (Leopard gecko): 129330042
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Entry
129330042 CDS
T09084
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emc03016
]
129330042 (TRMT13)
Enzymes [BR:
emc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
129330042 (TRMT13)
Transfer RNA biogenesis [BR:
emc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129330042 (TRMT13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
Motif
Other DBs
NCBI-GeneID:
129330042
NCBI-ProteinID:
XP_054835864
UniProt:
A0AA97KYN1
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Position
5:complement(49480628..49493292)
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AA seq
468 aa
AA seq
DB search
MAEKLAASVSPQLERCAYFVERKRRFCKMVPARGKRFCGEHGALEEENNRKRIQCPLDSK
HTVYEDQLQKHLRKCNSREKPKPVYFARDINAGLKEATGLPEEKQVPIFALSKEELEDLI
RKLRKASNDIKSVLKDQTCSHQALQEALNDPKNGDAAFKHLKQQASILGNMERLNLLGPR
RCFVEFGAGRGKLSHWVDIALQDAKDVHFLLVERATTRFKVDGKHRKNGFERLQVDIQHL
CLNKVPVLVKEKLPAVGIGKHVCGSATDLALRCLVETYANLSDDDRRGGPEAKRLKIERT
SRIPTNSPSETCSDSVAENWSPVAGIVIALCCHHRCDWKHYVGREFFTTVGLGVTEFNYF
KRMTSWATCGMRERSPLTSTIETESEEHEPHDRSVECSSDSLQGLLTTEERKQIGRLCKL
LLDHGRIEYLQQRGYDAVLQYYTDLDVSLENVLLTAVPHQSSLSHSDS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctggcggcgtcggtttcccctcagcttgagcgatgcgcttattttgtg
gaacggaagagacgcttctgcaagatggtgccggcacgcggaaagcgtttttgtggggaa
cacggcgccctggaggaagaaaataacaggaaaagaattcagtgccctctggattcaaaa
cacactgtatatgaagatcagctacaaaaacacttaagaaaatgtaattcaagagagaaa
ccaaagcctgtctactttgctagagatattaatgcgggattgaaagaggcaacaggactg
cctgaggaaaagcaggttcccatttttgctctctctaaagaagagttggaggatttaatt
agaaagctgagaaaagcaagtaatgatataaaatctgttcttaaagaccaaacctgttct
catcaggccttacaggaagctctaaatgacccaaaaaatggagatgctgcttttaaacat
ttgaaacagcaggcttctatattaggtaacatggaaagattaaatttgcttggaccacgg
agatgttttgttgaatttggagctggacgaggaaagttgtctcactgggtcgatatagct
ttacaagatgctaaagatgttcacttcctccttgttgaaagagcaactaccagatttaag
gtggatgggaagcacagaaaaaatggctttgaaaggcttcaagttgatatacagcacttg
tgcttaaataaggtaccagttcttgtaaaagagaaactacctgcagtaggcattggaaaa
catgtatgtggctctgcaacagatctcgctctgagatgtttggttgaaacctatgcaaat
ctttctgatgatgatagaaggggaggtccagaagctaaacgcttgaagattgagagaacc
agcagaattcctactaattctcccagtgaaacgtgtagtgattctgtagctgaaaactgg
agtcctgtggctggaattgttattgcgctgtgttgccatcacaggtgtgactggaagcat
tatgtgggtcgagagttttttaccacagtagggctcggggtgacggaattcaactatttt
aaaagaatgacaagctgggccacgtgtggcatgagagaacgttctcccctaacctctaca
attgaaacagagagcgaagaacatgagcctcatgacagaagtgtggagtgcagttcagat
agtctgcaagggctgctgaccactgaggaacgaaagcagataggtcgcctttgtaaactg
ctgcttgatcatggccggattgaatatttacagcaaagagggtatgatgctgtcttgcag
tactacacagatcttgacgtgtcattagaaaatgtgctcttgacggcagtaccacatcag
tcttcattatctcactcagattcttaa
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