Eublepharis macularius (Leopard gecko): 129330330
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Entry
129330330 CDS
T09084
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emc03036
]
129330330 (HFM1)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129330330 (HFM1)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
129330330 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
129330330
NCBI-ProteinID:
XP_054836336
UniProt:
A0AA97JFL8
LinkDB
All DBs
Position
5:55654716..55752794
Genome browser
AA seq
1443 aa
AA seq
DB search
MTDTACSLDSLFFKGPDEKLKYLENEAPTNWYLAPVPSVFEIPPSQKLQMEFEKNNQQDE
YVDESICSAFRKSLFKPPDYTFINTDCKENTNAKRGMDTDCNIFNNKGMKMGELGKNNTQ
IAQYSDFNLFSVNDIFSVSANGKGIEKVQSFPCVSRSFSAAEETPKKELMFLRPVTEIPA
QFRNIFKEFPYFNYIQSKALDDLLYTDRNFVVCAPTGSGKTVMFELAIIRLLIKVPTPWL
NIKIVYMAPIKALCSQRFEDWKEKFEPIGLVCKELTGDTAMDDLFEIQHAHVILTTPEKW
DSMTRKWRDNSLVQLVKLFLIDEVHVVKDESRGATLEVVVSRMKTVQSSLSRSSENHDSV
HLMRFVAVSATIPNAEDIAEWLSDGKNPAVCLKIDEKHRPVKLRKIVLGFPCSSNQTEFK
FDLTLNYKVASVIQTYSEQKPSLVFCATRKGVQQAASVLAKDAKFIMNIEQKQRLQKSAN
SVKEARLRDLLVCGVAYHHAGIEVSDRKIIETTFNMGDIPVLFTTSTLAMGVNLPAHLVV
IKSTMHYAGGVFQEYSETDILQMIGRAGRPQFDTTATAVIMTRLNTRDKYVQMLSGADTI
ESSLHTHLIEHLNAEIVLHTITDVNIALEWIRSTFLYIRALKNPAHYGFSVGLDRAGIEA
KLQELCLKNLNDLSSLNLIKMDEELYFKPTETGRLMAWYYIAFDTLKKCFMINGTETLSE
LVTLISSCNEFSDIKLRTNEKKILNTLNKDKNRISIRYPMDGKIKTREMKVNCLIQAQLG
CIPIQDFTLTQDIGKIFRNGIRITKWLSEFLATQQNNFLVLLNSLILAKCFRCRLWENSL
YVSKQLEKIGVTLSNVMVNAGLTSFKKIEDTNARELELILNRHPPFGNQIKESIAHLPKY
ELTVEQLPKYSETVAEILVSVILTNFEQLQIKRTAPDYHHVTLIIGDDDDQVVFKQKITD
SAMLKIGNWTKKVEVRRAVKSEELTINLISSEYVGLDIQQKFKAVYIGPKRYGNKMFSTH
GNLEDECSSDSLPAARINKGATCNREILNIKYGNRKCNHHCKNKEICGHDCCKIGVSKKS
DLRKESNFSSYLADLRNRDAVSAVPPVKRLKMHLSDKSQNVQLKQFGYTPKSLLPRLPRS
EYTPHLERPLLDEGNKPDVLGRVQLQAEGFKDTGFCVSKQPATLNEKRHQKIISNNDFKK
SLMNNLTDADKSNTLFSEPLNVNFELGDEVWDDYDDESLVHASHFTDDIENSEPSHLGSI
NAYLQSSGKTKSLFRDTQRKYPGAHLKSFSELEEKPDICLQNSDFSSLSPPSSDVISSAE
YGNKNIFGFQETNNLLPQLKNAQLTTASKAVSGSYRFSGKEDFFICNKGITKEADLRSPI
REVSAETGLSGDNDVIEAHCYPVRARRPPGYLKDYIQVIAKEEEENLKREGCSKRDSKEF
TGT
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgacagacactgcctgttctttggatagtttgttttttaaaggaccagatgaaaaactc
aaatatctagaaaatgaagcgccaacaaactggtatcttgcacctgttccatctgttttt
gaaattccaccatctcaaaagctacaaatggaattcgaaaaaaataatcaacaagatgaa
tatgttgatgaaagcatctgctcagcattcaggaaaagcttatttaaaccacctgattat
acgtttataaatacagactgtaaggagaacaccaatgccaagagaggaatggacacagat
tgtaatatttttaacaacaaagggatgaaaatgggagagctagggaaaaataatacacaa
atcgcacaatattcagattttaatctgtttagtgtaaatgatattttttctgtttctgca
aatggaaaaggaattgaaaaagtacagtcatttccttgtgtttcaaggagctttagtgct
gctgaagaaacacctaaaaaagaattaatgtttttgagacctgttactgaaattcctgct
cagttcagaaatattttcaaagagttcccatattttaattatattcagtccaaggctctg
gatgatctcctttatacagacagaaattttgtagtctgtgctccaacaggttctggaaaa
actgtgatgtttgagcttgcaattatcaggttattaatcaaagtgccaacaccttggtta
aatattaaaattgtatatatggctccaataaaagctctctgcagtcaacgttttgaggac
tggaaagaaaaatttgaacccattggacttgtctgtaaggaactaaccggagatacagca
atggatgacttatttgaaatacaacatgctcacgttattctgaccacaccagaaaagtgg
gacagcatgactcgaaagtggagagataactctttagttcagctagtgaaattgtttctt
attgatgaggtacatgtcgtgaaagatgaaagccgtggtgcaacacttgaggttgtggtt
agccggatgaaaacagttcagtcttctctttcacgtagctctgagaaccatgacagtgta
catctcatgagatttgtggcagtttctgcaacaatcccaaatgctgaagatattgcagaa
tggctttcagatggcaagaaccctgctgtatgtctaaaaatagatgaaaaacaccgacca
gtgaagcttcgcaaaatagttcttggatttccctgcagtagcaaccaaacggaattcaaa
tttgacttaacacttaactacaaagtagctagtgttattcaaacgtattctgaacaaaaa
ccttcacttgtgttctgtgccacaaggaaaggagttcagcaagccgcttctgtcctagca
aaagatgctaaatttattatgaatatagaacagaaacaaaggttacaaaagtctgcaaat
tcagtaaaggaagccagactgagggatcttttggtctgtggagtagcttatcatcatgct
ggaattgaggtgtctgatagaaaaataattgaaaccacttttaatatgggagacatacca
gtgctttttactactagtacacttgctatgggagtaaatttaccagcacaccttgttgtt
ataaaatcaactatgcattatgctggaggagtatttcaggaatacagtgaaactgatatt
ttacaaatgattggaagagcagggagacctcaatttgatacaacagcaacagcagttatc
atgaccaggctaaatacaagagacaaatatgttcagatgttaagtggggcagatacaata
gaaagcagtttgcacacacatcttattgaacatttaaatgctgaaatagtgctccacacc
atcactgatgtgaacatagctttagaatggatacgatcaacattcctgtacatcagagct
ttgaagaatccagctcactatggtttttcagttggattggacagagctggaattgaagca
aaattacaagaattatgtttgaagaacctgaatgatttatcatcacttaatctaatcaag
atggatgaggaactttatttcaaaccaacagaaactgggagactaatggcttggtattac
attgcgtttgataccttgaaaaagtgtttcatgattaatggaacagagactttatctgaa
ctggtcacattgatatcaagctgtaatgaattttcagatatcaagttaagaacaaatgag
aaaaaaatactgaatactttgaataaagacaagaacaggataagcataagatatccaatg
gatggaaaaataaaaacaagagaaatgaaggtgaactgtcttattcaggcacagctagga
tgcattcccatacaagatttcacattgacacaagacataggcaagattttcagaaatggc
ataagaattacaaaatggttatctgaatttctggccacccagcaaaacaacttccttgta
ttattaaactctttgattttagcaaagtgcttcagatgtagactgtgggaaaactcattg
tatgtatccaaacaactggaaaaaattggtgtgacattgtcaaatgtaatggtgaatgca
gggctgacgtcttttaaaaaaattgaagatacaaatgcaagggaacttgaattgattttg
aataggcatcctccttttggaaatcaaattaaagaatccatagctcatcttccaaaatat
gaacttactgtagaacagttgccaaaatatagcgaaacagtagctgaaatcttagtgtca
gtcatattaaccaactttgagcagctgcagataaagagaactgctccggattatcaccat
gtaactttaataataggagatgatgatgatcaggtggtttttaagcaaaagattacggat
tctgctatgctaaaaattggaaattggactaaaaaggttgaagtaagaagagctgttaaa
tctgaggagcttaccattaatctaatcagttctgaatatgttgggctagatattcagcaa
aaatttaaagctgtttacattggacctaagaggtatggaaacaaaatgttcagtacacat
ggaaatttagaagatgaatgttcatctgatagcttgccagcagcaaggattaataaagga
gccacttgtaaccgagagatcctcaacataaaatatgggaacagaaaatgcaaccatcac
tgtaaaaataaagaaatatgtggacatgactgctgtaaaattggagtttcaaagaaatct
gacttgaggaaagagtctaatttttcttcgtatcttgctgatttgaggaaccgggatgct
gtatctgctgttcctccggtcaaacgattaaagatgcatctgtcagataaatctcagaat
gtgcagcttaaacaatttggttatactcctaaatcattacttccaagattgccaaggtca
gaatatacaccacatttggaacgtccattattagatgagggaaacaaacctgatgttctt
ggaagagttcagctgcaagctgaaggtttcaaggatactggtttctgtgttagcaagcaa
cctgcaactttaaatgaaaagagacatcagaaaataatttcaaacaatgatttcaaaaaa
tctttaatgaataacttgactgatgcagataaaagcaacactctgttttcagaacctttg
aacgtgaattttgaattaggagatgaggtttgggatgattatgatgatgagagtttagta
catgccagccattttactgatgatatagagaattcagaaccttctcatctgggatctata
aacgcataccttcagagctcaggaaaaactaaatcccttttccgtgatacacagaggaaa
tacccaggtgcgcatttgaaaagtttttctgaattggaagagaaacctgatatatgccta
caaaattctgacttttcctcattgagcccaccgtcatcagatgtgatatcatctgcagaa
tatggaaataaaaacatttttggctttcaagaaacaaacaatcttctgccacagctgaaa
aatgcacagttgactacagcctcaaaagccgtctcaggatcttacagattcagtggaaaa
gaggacttctttatctgtaacaaaggaataacaaaagaagctgatctcaggtcaccaatt
agggaagtttctgcagaaactggcctttctggggataatgatgtgatagaagcacactgc
tatcctgtgagagcaagaagacctcctgggtatttgaaagactatattcaagtgattgct
aaagaagaagaagaaaacttaaagagggagggatgtagtaaaagggatagtaaagagttt
actggaacctga
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