Eublepharis macularius (Leopard gecko): 129330350
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Entry
129330350 CDS
T09084
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129330350 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129330350 (PRPF38B)
Spliceosome [BR:
emc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129330350 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
129330350 (PRPF38B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
129330350
NCBI-ProteinID:
XP_054836357
UniProt:
A0AA97L152
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Position
5:complement(43999362..44011033)
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AA seq
557 aa
AA seq
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MANNCPMLGAGNCHPLPPQHQGVQPQHPQAGAVLSPPLPLQSAGPKPAASGKQGNVLPLW
GNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQT
GMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQP
PTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFTTLFPRIPVPVQKNID
QQIKARPRKIKKDGKEGVEEVERHAERRRSRSPRRSLSPRRSPRRSRSRSRHREGRGSSS
FDRELERERERQRLEREAKERERERRRSRSSDRALERRRSRSRERHRSRSRDRKGDRRDR
EREREKENERSRRKERDYDKERGNERERERSRERERSREKSKDRKNKSEIEEKRHKDEKD
ERKHRDEKRDAKKERRHSRSRSRDRKHRSRSVSRNAGKHSRSRSKEKSSKHKSESKEKSN
KRSRSRSRGRTDSAEKSRKRELSPSKERSRKRSKSKERSHKHDSSDKDHSDKHDHQRSQS
TERENQEKQSKNKDETV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaactgccctatgctgggcgccgggaattgccacccgctgccgccgcagcac
cagggggtccagccgcagcatccgcaggccggcgccgtcttgtcgcccccgttgccgctc
cagagcgcgggccctaagccggcggcctcgggcaagcaaggcaacgtcttgcctctatgg
gggaacgagaaaaccatgaacctgaaccccatgatcctcaccaacatcctctcctcgcct
tacttcaaggtgcagctctacgagctcaagacgtaccacgaggtggtcgatgagatctac
ttcaaggtcacgcatgttgagccttgggagaaagggagcagaaaaacagcaggccagaca
gggatgtgcggaggggtgcgtggtgttgggactggtggcatagtgtccacagctttttgc
ctgctgtacaaattatttaccttgaagcttacccgtaagcaagtgatgggactaataact
catacagactccccatatataagagcccttggattcatgtatattaggtacacacagcct
ccaacagatttatgggactggtttgaatcctttcttgatgatgaggaggaccttgatgtg
aaagcaggtggtggctgtgtcatgaccattggagagatgctgcgctctttcctaactaaa
cttgaatggtttactacgttatttccgaggattccagtaccagtccagaaaaacattgat
cagcaaattaaagccagacctagaaaaatcaagaaagatggcaaggagggagtagaagaa
gtggaaagacatgcagaacgtagacgttcaaggtctccaagaaggtccttgagtccccgg
aggtcacctagaagatcaagaagcagaagtcgtcatcgggaaggtcgtgggtcatccagc
tttgacagagaactggagagagagcgagaacgacaaagactagagcgtgaagcaaaggag
agagagagggagaggcgaagatcccgaagttctgatcgggctttggaacggaggcgaagt
agaagcagggagaggcacagaagtcgaagccgtgatcgaaaaggagacagaagggacagg
gaaagggaaagggagaaagaaaatgaacgaagtaggaggaaagaacgggactatgacaaa
gaaagaggcaatgaaagggaaagagagcgctctagggagagagagcgctctagggaaaaa
tcaaaagacagaaaaaataagagtgaaatagaagagaaaaggcacaaagatgaaaaagat
gaaaggaagcatagggatgagaaaagagatgccaagaaagagaggagacatagtcggagt
agaagtagggatcgaaagcataggagtagaagtgtgagtaggaatgctggcaagcacagt
agaagcaggagcaaagagaaatcaagtaaacacaaaagtgaaagcaaagagaaatcaaat
aagcggagtaggagtaggagcagaggaagaactgatagtgctgaaaagtcccggaaacgt
gagcttagtcccagtaaagagagatcacggaaacgtagtaaaagcaaagaacgttctcat
aagcatgactccagtgataaggaccactcggacaaacacgatcatcagaggagccaaagt
acagaacgagaaaatcaagaaaaacaatctaaaaacaaagatgagactgtatga
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