KEGG   Eublepharis macularius (Leopard gecko): 129330350
Entry
129330350         CDS       T09084                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129330350 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:emc03041]
    129330350 (PRPF38B)
Spliceosome [BR:emc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    129330350 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    129330350 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 129330350
NCBI-ProteinID: XP_054836357
UniProt: A0AA97L152
LinkDB
Position
5:complement(43999362..44011033)
AA seq 557 aa
MANNCPMLGAGNCHPLPPQHQGVQPQHPQAGAVLSPPLPLQSAGPKPAASGKQGNVLPLW
GNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQT
GMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQP
PTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFTTLFPRIPVPVQKNID
QQIKARPRKIKKDGKEGVEEVERHAERRRSRSPRRSLSPRRSPRRSRSRSRHREGRGSSS
FDRELERERERQRLEREAKERERERRRSRSSDRALERRRSRSRERHRSRSRDRKGDRRDR
EREREKENERSRRKERDYDKERGNERERERSRERERSREKSKDRKNKSEIEEKRHKDEKD
ERKHRDEKRDAKKERRHSRSRSRDRKHRSRSVSRNAGKHSRSRSKEKSSKHKSESKEKSN
KRSRSRSRGRTDSAEKSRKRELSPSKERSRKRSKSKERSHKHDSSDKDHSDKHDHQRSQS
TERENQEKQSKNKDETV
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggccaacaactgccctatgctgggcgccgggaattgccacccgctgccgccgcagcac
cagggggtccagccgcagcatccgcaggccggcgccgtcttgtcgcccccgttgccgctc
cagagcgcgggccctaagccggcggcctcgggcaagcaaggcaacgtcttgcctctatgg
gggaacgagaaaaccatgaacctgaaccccatgatcctcaccaacatcctctcctcgcct
tacttcaaggtgcagctctacgagctcaagacgtaccacgaggtggtcgatgagatctac
ttcaaggtcacgcatgttgagccttgggagaaagggagcagaaaaacagcaggccagaca
gggatgtgcggaggggtgcgtggtgttgggactggtggcatagtgtccacagctttttgc
ctgctgtacaaattatttaccttgaagcttacccgtaagcaagtgatgggactaataact
catacagactccccatatataagagcccttggattcatgtatattaggtacacacagcct
ccaacagatttatgggactggtttgaatcctttcttgatgatgaggaggaccttgatgtg
aaagcaggtggtggctgtgtcatgaccattggagagatgctgcgctctttcctaactaaa
cttgaatggtttactacgttatttccgaggattccagtaccagtccagaaaaacattgat
cagcaaattaaagccagacctagaaaaatcaagaaagatggcaaggagggagtagaagaa
gtggaaagacatgcagaacgtagacgttcaaggtctccaagaaggtccttgagtccccgg
aggtcacctagaagatcaagaagcagaagtcgtcatcgggaaggtcgtgggtcatccagc
tttgacagagaactggagagagagcgagaacgacaaagactagagcgtgaagcaaaggag
agagagagggagaggcgaagatcccgaagttctgatcgggctttggaacggaggcgaagt
agaagcagggagaggcacagaagtcgaagccgtgatcgaaaaggagacagaagggacagg
gaaagggaaagggagaaagaaaatgaacgaagtaggaggaaagaacgggactatgacaaa
gaaagaggcaatgaaagggaaagagagcgctctagggagagagagcgctctagggaaaaa
tcaaaagacagaaaaaataagagtgaaatagaagagaaaaggcacaaagatgaaaaagat
gaaaggaagcatagggatgagaaaagagatgccaagaaagagaggagacatagtcggagt
agaagtagggatcgaaagcataggagtagaagtgtgagtaggaatgctggcaagcacagt
agaagcaggagcaaagagaaatcaagtaaacacaaaagtgaaagcaaagagaaatcaaat
aagcggagtaggagtaggagcagaggaagaactgatagtgctgaaaagtcccggaaacgt
gagcttagtcccagtaaagagagatcacggaaacgtagtaaaagcaaagaacgttctcat
aagcatgactccagtgataaggaccactcggacaaacacgatcatcagaggagccaaagt
acagaacgagaaaatcaagaaaaacaatctaaaaacaaagatgagactgtatga

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