Eublepharis macularius (Leopard gecko): 129330417
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Entry
129330417 CDS
T09084
Symbol
RNF220
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129330417 (RNF220)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129330417 (RNF220)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129330417 (RNF220)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
Pox_A_type_inc
Endonuclease_7
Rad50_zn_hook
DUF4428
Motif
Other DBs
NCBI-GeneID:
129330417
NCBI-ProteinID:
XP_054836419
UniProt:
A0AA97KZ70
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All DBs
Position
5:complement(98317258..98706779)
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AA seq
589 aa
AA seq
DB search
MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVDKDVHI
PFTNGSYTFASMYHRQGGVPGAFTNRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTDSPHLRFSDADGKEYEFGAQLPSGSPGSLKVD
DTGKKIFAVSGLISDRETSSSPEDRNDRCKKKATLFDSQAPICPICQVLLRPGELQEHME
QELEKLTQLNISKNTILKDVMAPGTPKSILLSASIKREGDSPTASPHSSDDIHHSDRYQT
FLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCSQPLSGSEEERSRHVEQCLAKREGSCM
IEDDSVDIENESGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVD
GDDTLEYGKPQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRITPEFSKWASDEM
PSTSNGESSKQEPMQKTCKNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLIC
MDSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRIYL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggacttacaccgagcagccttcaagatggaaaactcctcctaccttcccaatcctctg
gcatctccagccctcatggttcttgcttccactgctgaagccagccgtgatgcttccatc
ccttgccaacagccgaggccctttggcgtccctgtgtcagtggacaaggatgttcacatc
ccattcactaatggctcctatacttttgcctccatgtatcaccgacaaggtggggtgcca
ggagcattcaccaaccgtgattttccaccttccttgcttcatctccacccccagtttgct
ccccccaatctggactgcaccccaataagtatgctgaaccacagtggtgttggggccttc
cgtccctttgcctccactgaggacagggaaagttaccagtcagcttttacgcctgccaaa
cgcctgaagaactgccatgatactgactctccccaccttcgcttctcagacgctgatggc
aaggagtatgagtttggagcccagctcccatcaggctcccctggctccctcaaagtcgat
gacacagggaaaaagatctttgccgtttctggcctcatttcagatcgggagacctcatct
agccctgaggaccgaaacgatagatgcaaaaagaaagcaacacttttcgacagccaggct
cccatctgccccatttgtcaggtcttgcttcgtccaggtgaactgcaagagcatatggag
caggagctggagaagttaacacagctcaacatcagtaagaacactatattgaaggatgtt
atggccccaggcacccccaagtcaattttgttgtcagcctcaatcaagcgggaaggagat
tctcccacagcatcacctcactcttcagatgatatccatcattcagacagataccagact
tttcttcgagtgagagcaaacagacagactcggctgaatgctcggattgggaaaatgaaa
cggaggaagcaagacgaagggcaggtatgtcccctctgcagccagcctctctcaggatcc
gaggaggagaggagtaggcatgtcgaacaatgccttgcaaagagggaaggttcatgcatg
atagaggatgactctgtggacattgagaatgagagtggtaatcgctttgaagagtatgaa
tggtgtggacagaagaggatacgtgccaccaccctactggaagggggattccgaggatcc
ggattcgtcatgtgcagtggtaaggagaatccagacagtgatgctgaccttgatgtggat
ggagacgacacactggaatatgggaaaccacaatacacagaagcagatatcattccatgt
actggggaagaaccaggggaagctaaagagagagaggcgcttcgaggtgctgtattaaat
ggtggcacgcctagtactcgaataacaccagaattctctaagtgggcaagtgatgaaatg
ccatcaacaagtaatggcgaaagcagtaaacaggagcccatgcaaaagacctgcaagaac
agtgacatagaaaagattacagaagattcagcagtgacaacatttgaagcgctaaaggct
cgcgtccgtgaattagaaaggcagctctcccgtggggaccgctataaatgtctcatttgc
atggactcatacacgatgcccctgacctcaattcagtgctggcatgtgcactgtgaggaa
tgctggctgcggactttgggtgccaagaagctgtgccctcagtgcaacaccatcacctct
ccaggggacctaaggcgcatctacttatga
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