Eublepharis macularius (Leopard gecko): 129330433
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Entry
129330433 CDS
T09084
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
emc
Eublepharis macularius (Leopard gecko)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
FN3_Tor_3rd
CBM_4_9
Laminin_G_3
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
129330433
NCBI-ProteinID:
XP_054836437
UniProt:
A0AA97JDT6
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All DBs
Position
5:164461308..164617345
Genome browser
AA seq
1479 aa
AA seq
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MERDTERTPHPLGDETKQQGEKEAAGRKEVPERSNRLKLTVLSEDRLQMKWKETEGNTNG
YKVRVKPMAGDSEQEVMLKTKTAKATVGGLSPTKEYTLQIYILNGSQEALFVKRRFVIEE
LKNFSQARSNRRNPTSAPEKAETFLETTAAEYILETEATLPPTSEILIRKDEPDKKRQKA
AMPRSRIENASSAEPAVTLAPATTTRITPLPSQMDFEIDYLPQEKTTRESLRRVSNFQCH
SSARTDIIFLVDGSWSIGRNNFRLIREFLAALVAPFNIAQDKIRVGLSQYSSDPRTEWDL
NTYSTRDEVLGALRSLHYKGGNTFTGLALTHVLEQNLKAEAGARSEAAQLIILLTDGKSQ
DDASPSAQTLKNMGIEIFAVGVKNADEAELRQVASDPLELTVYNVLDFPLLSSLVGRLTR
VLCARIKEKNKEENTGDPIETAPVNSGAHLSPSNLVVKEVTSRSMHLIWKPPVIPPKKYR
VVYYPSRGGIPKEVVLDGSASAVQLFNLTSHTEYLVSVFPIYENAVGDGLRGITSTLPLS
APRSLRAAEISHNSIRLTWQPADGATQYLVLCSSTPNGANDDTKEVKVVEPEVLLRGLSP
STEYSLAVYAMYGEDASDPASIQETTLALSPPLRLSFSDISHGSVRVNWEATLRAVKTHR
VTYISSRGSNTGEVEVPGNVSSAVLKPLSSLTKYFVSVTSIYDEGESFPVTGNVTTLKVP
PPSHLKVTELSGSEIRLEWEAIAASDVIVYQIKWNVLGEGRSQELSVAGNLAAAVLSGLK
KNTEYQISIWAYYKDGARSDTVSVRHRITTKNPPANLFVDSESTNSLQVHWSPPEGAVQH
YRLTFTPETGNKHQEMIMLSGKSRTVTLHSLLPGTVYTVTVSAVYATGESDPISTTGQTA
SALARLPTSRGSVPFKSDDCPALDSTEGSLQGFDLMEAFGLKEKEYASIKGVAMEPYIFL
GTHTYTLYRDIQLTRQTSEVFTSGIPNEYTIAFLLRLLPESPREAFAVWQVTDEDFQPLL
GIVLDPNKKSLTYFSRDYDADVEEVTFDQQDVKKIFYGSFHKVHVAVSRSRVKLYIDCKK
IAEKPLGASEKVSTAGFVMLGKLTRTRGPRSGSAAFQLQSLRIVCSSLWAEEDRCCEVPA
LRDEEVCPSFHPSCTCTSGIPGIPGPPGPPGIPGRRGPQGEQGEPGPKGAPGPPGQVGPE
GPGGQQGAPGSEGLAVEGPIGPPGIKGDKGDNGSPGMQGIMGPQGAPGKDGIQGAKGVRG
LEGTAGPPGPPGPRGFQGTAGARGSTGERGPPGEVGPTGLPGPKGERGEKGEPQSIATIY
HLVNQACERLIQSHVLKFDAFIHEHTRKPVPIWEDKLKAGEPGPPGLPGPPGMKGERGEV
GMPGQPGRDGYPGERGFPGPKGEKGSSGPSEEGSEGPRGRAGPAGETPLGKQGPKGALGS
TGAPGFPGARGQPGDPGPAGRCITSDCYEESSRDAELIP
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatactgaaagaacacctcaccctcttggagatgagacaaagcagcaggga
gagaaagaggcagccggaaggaaggaagtccccgagagatcaaaccggttgaagctgaca
gtcctgtcggaagacagactgcagatgaaatggaaagagacggaaggaaacaccaatggg
tacaaagtccgtgtgaagcctatggcaggagattcggaacaggaggtcatgctcaaaacc
aagacagctaaagcaacagtgggggggctgagccccacaaaagagtacactctgcagatc
tacatccttaacggttcccaagaggctctctttgtcaagaggcggtttgtgattgaagaa
ctaaaaaacttctcccaagcgagaagtaacagaaggaacccgacaagcgccccggaaaag
gcagagacgttcctggagaccacagctgctgaatatatcctggagactgaagccacattg
ccacctaccagcgaaattctgataagaaaggatgagccagacaagaaaaggcaaaaagca
gccatgcccagaagcaggattgaaaacgcctccagtgcagagccagcggtgaccctggca
cccgcaactacaacgaggataacacctctcccaagtcagatggattttgaaatagactat
ctgccccaagagaagacgacccgggaaagcttaaggagagtttctaactttcagtgtcac
tcgtctgcaaggactgatatcatctttctggtggatggctcctggagtattggccgtaac
aatttcaggctcatcagagaattcctggctgctttggttgcgccgttcaacattgctcag
gacaagatcagagtcggcttatcccaatacagcagtgatccacgtacagaatgggacctg
aatacatacagcacccgggatgaggtgttaggggcgctgaggagcttgcattacaaagga
ggaaacactttcacaggtcttgcactgacccacgtcctggaacagaacctgaaagcagaa
gcaggcgctcggtcagaggctgcccaactgatcatcctcttgactgacggcaaatcacag
gatgacgccagcccatctgctcagacattgaagaacatgggaattgagatctttgcggtt
ggagtgaaaaacgccgacgaggcagaattgcgccaagtggcctccgatcctttggagctg
acggtgtacaacgtcctggacttccccctgctcagctctctggttggccggcttacgcga
gtcttgtgcgctcggatcaaagagaagaacaaggaggagaatacaggtgatccaatagaa
actgctcccgtgaacagtggtgcccatttgagcccaagcaacctggttgtaaaagaggtg
acttccagaagcatgcacctcatctggaagcctcctgtgataccacccaagaagtatagg
gtggtctactacccatccaggggtgggatccccaaagaggtagttttagatggttctgcc
tccgctgtccagctcttcaatctgacatcccacaccgaatacctggtgtcggtattcccc
atttatgaaaacgcagttggagatgggctccgaggtatcacctcaacattacctctgtct
gctcctcgttcccttcgagcagctgaaatcagccacaacagtataagactgacctggcag
ccagcagatggcgctactcagtatctcgtcctttgttcctcaacacccaacggagcaaac
gatgatactaaagaggtgaaagtagtggagcctgaagttctgctccggggtttgtccccc
agcactgaatactctctagctgtgtacgcaatgtatggagaagatgctagtgaccccgca
agtattcaggaaactaccttggccctgagccccccactacgcctgagtttctcagatatc
agccatggctcagtcagggtcaactgggaggcgactttgcgtgctgtgaaaactcaccgt
gtgacatatatctccagcaggggaagcaacactggagaggtagaggttcctggcaatgtt
tcatctgctgtgctgaagcccctgtcgtcactgacaaaatattttgtcagcgtgacttcc
atttatgatgaaggcgaatccttccctgtaacgggcaacgttactacgttaaaggtaccg
ccgccgagccatttgaaggtcactgagctctcaggaagtgagatccggttggaatgggaa
gcgatcgcagcatccgacgtgattgtctaccagatcaaatggaatgtgctcggtgaaggg
aggtcacaggagctctctgttgctggaaacttggcagccgctgttttgtctggtctgaaa
aagaacactgaataccaaatatcgatttgggcgtattacaaagacggggctcggagtgat
accgtctcggttcgacacaggatcaccaccaagaatccacccgcaaacctctttgtggat
tcggaaagcaccaacagcctgcaagtccactggagccctccagaaggcgctgtgcagcac
tacagactcaccttcacgccagaaacaggcaacaagcaccaggagatgataatgctttca
ggtaaaagccggacggtcacacttcattcactcctccctggtacagtatacacggtgaca
gtttctgcagtctatgccacaggagagagtgaccccatatctaccactggccagacagcc
tctgctttggccagattgcccacctcaagaggatctgtccccttcaaaagtgatgactgc
cctgctctcgactccacggaaggctctttacaagggtttgacctgatggaggcttttgga
ctcaaggaaaaagagtacgcctccattaaaggagttgcgatggagccatacatcttcctc
ggaactcacacttacaccctctacagagatatccaactgacacgccaaacaagtgaagtt
tttacttctggaatcccaaacgaatacaccatcgccttcctgctccgacttctgccagag
agccccagggaagcctttgctgtgtggcaggtaacagacgaagacttccagccgcttctt
ggcatcgtgcttgaccccaataagaaatccctgacctatttcagccgtgactatgatgct
gatgtcgaagaagtcacctttgaccaacaggatgtgaagaagattttctacgggagcttc
cacaaggtgcacgtagcagtgagccgttccagggtcaaactctatatcgactgcaagaaa
atagccgagaagccacttggagcttcagagaaagtctcaaccgctggcttcgtcatgctg
gggaagctgacaaggacacgaggaccgcggagtggttcagcagcatttcagctgcagtcg
ttgcggattgtgtgtagcagtttgtgggctgaagaagacagatgttgtgaggtcccagca
ctgagagatgaagaggtctgtcccagcttccatccttcttgtacctgtacatcagggatt
ccaggcatcccaggacctccagggcctccgggcattcctgggaggagaggaccacagggg
gaacagggagagccgggccccaagggagctccaggcccacctgggcaggttggaccagaa
ggtccgggaggacagcaaggtgcaccaggttctgaagggctggccgtggagggacccatc
ggaccaccagggataaaaggagacaaaggagacaatgggagtccaggaatgcagggtatt
atgggtcctcagggagctccagggaaagatggaattcaaggagccaagggtgttcgaggt
ctagaaggcacagctgggccgccggggccaccaggaccaaggggtttccaaggaacagca
ggtgcgagaggcagcactggggagagaggccccccaggagaagtcggaccgacggggctg
cctggtcctaaaggagaaaggggagagaaaggtgaaccacagtccatagctaccatctat
cacctggtcaaccaggcctgtgagcgtctgattcagtctcatgttttgaagtttgacgcc
ttcatccatgaacacacgaggaagccagttcccatctgggaagacaaactgaaggcagga
gagcccgggccgcctggtcttcctggaccccccggcatgaaaggagaaagaggagaagtg
gggatgcccgggcagccgggcagagatggctatccaggagaacgaggtttcccaggaccc
aaaggggagaaaggttcttccggaccctccgaggaaggctcagaaggaccaagaggccga
gcaggcccagcaggggaaactccacttggcaagcagggacccaaaggagctcttggcagc
accggcgcccctgggtttcccggagctagaggccagcctggagatcctggccctgccggc
aggtgcatcacttccgattgctatgaagaaagctcaagagatgccgaattgatcccctga
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