Eublepharis macularius (Leopard gecko): 129330729
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Entry
129330729 CDS
T09084
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc00100
Steroid biosynthesis
emc01100
Metabolic pathways
Module
emc_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
129330729
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
emc01006
]
129330729
Enzymes [BR:
emc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
129330729
Prenyltransferases [BR:
emc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
129330729
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
Motif
Other DBs
NCBI-GeneID:
129330729
NCBI-ProteinID:
XP_054836871
UniProt:
A0AA97JG64
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Position
1:complement(218343524..218371345)
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AA seq
417 aa
AA seq
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MELLKTWLGHPKELYKLTKFKMGGYKAVMPKVDEESLSASLRACYKHLNQTGRSVAAVVR
ALDGELRDAMCIFYLVLRAVDTVEDDMTINLETKIPMLQNFHSYLYQPDWKFMESKEQHR
QVLEDFPTISLEFQNLAKVYQDVIVDMCRNVGLGMAEFLEKKEDSKKNWNMYCQYVARPI
GIGLSRLFSASELEEPIAGRDMEFAISVAFFLQKTNIIRDYLEDQVEGREFWSSEVWSKY
VNKLSDLAKPENIDKAVQCMNELITNTLHHVPDVLIFLSQLKNQSVFNFCAIPQVMAIAT
LAACYNNKQVFRGTVKIRKGQAVTLMMDATNIDAVKAIMYQYVEEIYQKIPSTDPSSSRT
QQIIASIRSMSVPSSALSRIHYSPIYLSCVMLLAALSWQYLSTVSKATEEFVHTGEN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagctcttgaagacgtggttgggccatccgaaggagctctacaaacttacgaagttc
aagatgggaggctacaaggcagtgatgcccaaggtggacgaggagtcgctcagcgccagc
ctccgcgcctgctacaagcatttgaaccagaccggccgcagtgtcgctgccgtcgtccga
gcgctcgacggagagttgcgcgatgccatgtgcatcttctacttggttctccgagctgtg
gacacggtcgaggatgacatgaccatcaatctggaaaccaagatccccatgttacagaac
ttccactcctacctgtatcagccggactggaaattcatggagagcaaggagcagcacaga
caggtgctagaggacttcccaacgatctccttggagttccagaacttggccaaggtctat
caggatgtgattgtcgacatgtgccgcaacgtgggccttgggatggctgagtttctggaa
aagaaagaggattccaagaagaattggaatatgtattgccagtatgttgctcgcccgatt
gggattggcctctcacggctcttctctgcatctgagctggaggagcccatcgctggacgc
gacatggagttcgccatctccgtggccttcttcctgcagaaaaccaacattattcgagat
tacctggaggaccaagttgaaggcagagaattttggtccagtgaggtttggagcaagtat
gtgaataagctgtctgatctggccaagccagagaacatcgacaaggccgtccagtgcatg
aacgaactcatcaccaacacgctccatcacgttcctgatgtcttgatcttcttatcccag
ctaaaaaaccaaagtgtattcaatttctgtgctattccgcaggtgatggccatcgccact
ttggctgcctgctacaacaacaagcaggtcttcaggggcacagtgaagatccggaaggga
caagctgtcaccctgatgatggatgccactaacatagacgctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatcccaagcactgacccttcttccagcagaact
caacagatcatcgcctccatccgatccatgagtgtacccagcagtgccctctcccggatc
cattactcccctatctatttgtcctgcgttatgctcttagccgccttgagctggcagtat
ctgagcaccgtctcaaaagcaactgaggaattcgtgcacacgggcgagaactga
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