KEGG   Eublepharis macularius (Leopard gecko): 129331206
Entry
129331206         CDS       T09084                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129331206 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emc03021]
    129331206 (TAF5L)
   03036 Chromosome and associated proteins [BR:emc03036]
    129331206 (TAF5L)
Transcription machinery [BR:emc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129331206 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     129331206 (TAF5L)
Chromosome and associated proteins [BR:emc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     129331206 (TAF5L)
    STAGA complex
     129331206 (TAF5L)
    TFTC complex
     129331206 (TAF5L)
    SAGA complex
     129331206 (TAF5L)
    SLIK complex
     129331206 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PROPPIN PEP5_VPS11_N Ge1_WD40 Beta-prop_NWD2_C Beta-prop_IP5PC_F WD_LRWD1 eIF2A Mala_s_1-like Nbas_N Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 129331206
NCBI-ProteinID: XP_054837594
UniProt: A0AA97JIJ0
LinkDB
Position
1:146332571..146347512
AA seq 589 aa
MKRVRSEQIQMAVSCYLKRRQYVDSEGPPKQGLRLCQTAEEMAANLTVQSESGCANIISA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTLTIQDIVSNFKLQAFLDNKYVVRLQEDSYNFLLRYLQ
SDNNNALCKVLSLHIHLDVQPAKRMDYQLYASGGSSRSESNGLEPADMPTSILQNEAALD
ILQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLRSK
KLKSEPHLIDVSRIHLACDIMDEEDEDDDNVGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDTSIRYWDLGCFTNTVLYQGHAYPIWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNTVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPIDGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEY
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgtgtacgctcagaacagattcagatggcagtttcctgctacctcaagcgccga
cagtatgtagactcagaaggtcctccgaaacaagggctgcgactgtgccagactgcagaa
gaaatggcagctaatctaacagttcaatctgaatcgggttgtgccaacattatatctgct
gctccctgcctagcagagccgcaacaatatgaagtacagtttgggcgactgcgcaatttt
cttacagattcagattctcagcatagccatgaagtgatgcctctcctgtatcccctcttt
gtctacctccatcttaacatggtccaaaatggcctaaagagcacagtggacagtttctat
agtcgcttccatggaatgttcttgcagaatgccagccagaaggatatcattgagcagtta
cagaccaccttaactattcaagacatcgtatccaacttcaaactccaggcatttctggac
aacaagtatgttgtccgtcttcaagaagacagctacaacttcctccttcgctacctccaa
agtgacaacaacaatgctctttgcaaagttctctccttgcacattcacttagatgtgcag
ccagccaagaggatggactatcagctgtatgctagcggtggttcttcacgcagtgaaagc
aatggcctggaacctgctgacatgcctacttccatcctgcagaatgaggcagccttggac
attctgcaggacagcatcaaaagagtcaaagatgggcctccttcactcaccaccatatgc
ttctatgcattttataacactgagcagttgctaaacacagcagagatctctccagacagc
aagctgcttgctgctggctttgacaattcatgtgtgaagctgtggagtttgcggtccaag
aagctgaaatctgagcctcatctgatagatgtgtcccgaatccacctggcttgtgacatc
atggatgaggaggatgaagatgatgataatgtgggtacagaaatgaagatcctcagagga
cactgtggtcctgtgtatagcacaaggtttctgtcagacagttcaggacttttgtcgtgt
tctgaagacacatccatcagatactgggaccttggatgttttacaaacactgtgttgtac
caagggcatgcttaccctatctgggatctggacatcagtccttgcagcttatattttgcc
agtggttcccatgaccgcacagcaagactctggtcatttgatcggacgtacccattgcga
atatatgcaggccatttggcagatgtggactgcattaagtttcaccccaattctaactac
ttggcaacaggatccacagacaaaacagtgcggctgtggagtacccagcaaggaaacact
gtgcgcctgttcacaggccaccgtggccctgtgctgtcacttgcattttctccaaatggt
aagtatttggcttcagcaggtgaagatcagcggttaaagctgtgggacttggcatctggc
actctttacaaagaactgagagggcacacagataatatcaccagccttacttttagtccg
gacagtagcttgattgcttctgcatcaatggacaactctgttcgggtctgggacattcga
aacacttactgtagtgctcccatagatggctcctccagtgagctagttggtgtatatacc
ggacagatgaataatgtactgagtgtacagtttatggcctgtaacctccttttagtgact
ggaattgcacaagaaaatcaagaatattaa

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