Eublepharis macularius (Leopard gecko): 129331246
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Entry
129331246 CDS
T09084
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129331246 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129331246 (RAE1)
03036 Chromosome and associated proteins [BR:
emc03036
]
129331246 (RAE1)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129331246 (RAE1)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129331246 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129331246
NCBI-ProteinID:
XP_054837662
UniProt:
A0AA97L2H1
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All DBs
Position
5:154752941..154780880
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AA seq
369 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPCNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAAVATAERGLIVYQLETQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtttgggtcaacttcaggttttggaactggaggcaccagtatgttcggcagc
acagctacagataaccacaacccaatgaaggacattgaagttacttctcctcctgatgac
agcattggttgcttggctttcagtccaccaacattgccatgtaatttccttattgcagga
tcgtgggcaaatgatgttcgttgttgggaagtccaggataatgggcagacaattccaaaa
gcgcagcagatgcacacggggcctgttttagatgtttgttggagtgacgatgggagcaaa
gtgtttacagcttcctgtgataaaactgccaaaatgtgggacctcaacagtaaccaggca
atacaaatcgcacagcacgaagctcctgttaagactgtccattggataaaagcacccaat
tacagctgtgtaatgactggaagctgggataaaacgctaaagttctgggatacacgatcg
ccaactccaatgatgacactgcagttgcctgagaggtgttactgtgctgacgtggtatac
cccatggctgctgtggctactgcagagaggggtttgatagtttatcagttagagactcag
ccttcggaatttcgaagaatagaatctccacttaaacatcagcatcgctgcgtggctatt
tttaaagacaaagtgaacaaaccaactgggtttgcccttggaagcatcgaaggaagagta
gccattcattacattaacccaccaaatcctgccaaagacaacttcactttcaagtgtcat
cgttccaatggcacaaacacttctgcacctcaggatatctatgctgtaaatggaattgct
tttcatcctgtccatggcactcttgcaactgtaggatctgatggtagattcagcttttgg
gataaagatgcacgaaccaagctaaaaacatcagagcagctggaccagcctatatctgcc
tgctgcttcaaccataatggcaacatttttgcatatgcttccagttatgactggtcaaag
ggacacgagttctataacccgcagaagaagaactatatctttttgcgcaatgccgctgaa
gagttaaaacccagaaacaagaagtattaa
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