Eublepharis macularius (Leopard gecko): 129331397
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Entry
129331397 CDS
T09084
Name
(RefSeq) tripartite motif-containing protein 54-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129331397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129331397
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129331397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_6
Sina_RING
ElaD-SseL-like_C
Motif
Other DBs
NCBI-GeneID:
129331397
NCBI-ProteinID:
XP_054837908
UniProt:
A0AA97JJ66
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All DBs
Position
5:complement(167483095..167543100)
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AA seq
548 aa
AA seq
DB search
MFFATETRASKERRPEARALVMSSHMEYSSCPRDCPTMDSLERQLICPICLEMFTKPVVI
LPCQHNLCRKCANDIFQSRGTTLGSAGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDI
YKQASASGPDRPLLKTEHPTCEEHEDEKINIYCVTCGVPTCSLCKVFGEHKECEVAPLSD
IYMKQKTELTDGIGALVAANDRIQVYINGLQGTCRNIEDNCKAQKQALCEKFDRMCVILE
ERRKIMLQRITYEQEEKTQHLKSLAKECGDHIESSSKLVDTSLQSMEEPQMAVFVQNAKV
LIRKILEMAQSCKLNPLESGYDNMEHYTVDFNAEERVLYQLDFVKVEEEPEPTTEEDGAC
GEAEDPLADSWTGAGEERDDPEGFVALGKEEQAPGALITSDDLAGVVSGVEGQAVPPSPL
SGAEGQAGTEGATWASQQKEDARVNGELHVADSDLPAFGAEGALQSNSVVDMGQPKVEGV
AREGFSATDSSSGTGEGGETGNAFLLNGAASAVSQGPASDPSADGGRNVQIIEPLLSSWF
NPTLWLHE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgcgacggagacaagggcaagcaaggagcggcgtccagaagcccgtgctctg
gttatgtcgagccacatggaatacagctcctgtccgagggattgccccacgatggacagc
ctggagaggcagctcatatgccccatttgcttagagatgttcaccaagccggtggtcatc
ctgccgtgtcagcacaacctgtgcaggaaatgtgccaacgacatctttcagtctcgaggg
acaaccctggggtctgcggggaggtttcgctgtccgtcttgccgccacgaagtggtcctg
gacaggcacggcatctatggcctgcaacggaatctcctggtcgagaatatcatagacatc
tacaagcaggcatcggccagcggtcctgacaggcctctgttaaaaactgagcatcccacc
tgtgaagaacacgaggatgaaaaaatcaacatctattgtgtgacatgtggggtccctacc
tgctccctatgcaaagtttttggggagcataaggaatgtgaagttgcgcccctctcggac
atctacatgaaacagaagacagagctgacggacgggatcggagctctcgtggctgccaat
gacagaatccaagtttacatcaacggtttgcaaggaacatgccgaaacattgaggacaat
tgcaaagctcagaagcaggccctgtgcgagaagtttgaccggatgtgcgtcattttggaa
gagaggcggaagatcatgttgcagaggatcacttacgagcaagaggagaaaacccagcat
ctgaaatccctcgccaaagagtgcggcgaccacattgaatcttcctccaagctggtggac
acgtctcttcaatcgatggaggagccgcagatggctgtttttgtgcagaacgccaaagtc
ctcatccgcaagattttagaaatggctcagagctgcaagctcaaccctctggagtctggg
tatgacaacatggagcactacacggtggatttcaacgctgaggaacgagtcctctatcag
ctggatttcgtcaaagttgaagaagagcccgaaccgacaaccgaggaagacggggcctgc
ggagaggctgaagacccattggcagactcttggacaggggctggtgaggagagagacgac
cctgagggcttcgttgccttgggaaaggaggagcaggccccaggagctcttataacaagt
gacgatctggccggtgtggtcagtggagtggaaggacaagcggtgcccccgtcacctcta
tctggggcagaaggccaggctggcacagaaggcgccacgtgggcctctcagcagaaagag
gacgctcgggtgaatggagagctccatgttgcagactcagatttaccagcatttggggca
gagggagctttgcagagtaacagtgtggttgacatgggacaacccaaagtggaaggtgtg
gctagagaaggcttcagcgccacggacagctcttcggggacaggggaaggtggtgaaact
ggaaacgcatttcttctgaatggagctgcgtctgctgtcagccagggtccagcgtctgat
cccagtgctgatggagggagaaatgtgcagatcatcgagccactcctcagcagctggttc
aatcctaccctttggctgcacgagtaa
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