Eublepharis macularius (Leopard gecko): 129331398
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Entry
129331398 CDS
T09084
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emc03000
]
129331398 (SOX13)
Transcription factors [BR:
emc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129331398 (SOX13)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129331398
NCBI-ProteinID:
XP_054837911
UniProt:
A0AA97JIR2
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Position
5:112280370..112343870
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AA seq
615 aa
AA seq
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MSMRSPASPQLELNGAGNMVNCTVKIEEKNENCYLSTQEEAISTTPGSEKPRRSPLPPSE
GIDPQTLPQESGSPADRVLDSRNPAFEPIISNREKLDFNKNLKEVMPTIEKLLSSDWKER
LLGKSPGESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQ
QMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPIPVTPDTQ
MALPIQPIPCKPVEYPMQLLHSPPPSALKRPASSGHLQIQESSQPLNLTAKPKGSELPSA
SCSPNLKISNCQSLTPGHGVSRELQTSPPSLPLGFLGEGDAITKAIQDARQLLHNQSRAI
DGPPNHPYRKDHISLDSSPAKEQMEESSLQRLDESMLTCDGDGSRHFPESRNNNHIKRPM
NAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKY
PNYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIAPQGTQVPPSSSDLMYQR
SVGMQLASPLMDHYLPRGMEPNMPVIVNTRSLKPEEGDGAEDSHSVPDGEMYHYSEDEDS
EGEDKSDGELVVLTD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccctgcctctcctcagctggagctcaatggagctgggaacatggtg
aactgcactgttaaaatagaagagaagaacgagaactgctacctgtccacacaggaagag
gcaattagcactacgcctggttctgaaaagccacgcagatcaccactgccaccgagtgaa
ggcatagatcctcagaccctcccacaggaatctggatctccagcagacagggtattagat
tccaggaaccctgcatttgagccaataatcagcaatcgggaaaaattggatttcaataag
aacctgaaagaagtaatgccaaccattgagaagttactgtcaagtgactggaaagagagg
cttctggggaaaagtcctggggagtccaaagaagtgaaaggaacccaagaaagcctggca
gagaaggaactgcagctgttggtcatgattaaccagctgtccaccctgcgggaccagctg
ctgacagcccattcggagcagaagaacatggcagctatgctttttgagaagcagcagcaa
cagatggagctggccaggcagcagcaggaacagattgccaagcaacagcagcagcttatc
cagcagcaacacaaaatcaacctgttgcagcagcagattcagcaggtcaacatgccctat
gtaatgattccagcttttcctcccagccaccagcctattccggtcacccctgatactcaa
atggcacttcctattcagccaatcccttgtaaaccagtggagtaccccatgcagctgctg
cacagcccacctccttcagcattgaagagacctgccagctcaggccacttgcagatccag
gaatcctcccagccgctgaacctaacagctaagcccaaaggctctgagctccccagtgcc
tcctgctcacctaatttaaagatcagcaactgtcagtctctcactcccggccatggagtt
tctcgggagctgcagaccagtcctcccagcctgcctttggggtttctcggagagggagat
gctataaccaaagcaatccaagatgctcggcagcttctacacaaccaaagcagagcaata
gatggccctccaaatcacccctataggaaggaccatatcagcttggattcttctccagca
aaagaacaaatggaagagtcttctttgcagagactggatgagtccatgttaacctgtgat
ggggatggctcacggcacttccctgaatccaggaacaacaaccacatcaagcgtcccatg
aatgccttcatggtgtgggccaaggatgagagacgcaagatcttgcaggccttcccagat
atgcacaactcgagcatcagcaagattttaggctcccggtggaaatcaatgtcaaaccag
gagaagcagccgtattatgaggagcaggcacgactcagccggcagcacttggaaaagtac
cccaattacaaatacaagccccgccccaagcgcacctgcattgtggaagggaagcggctc
cgtgttggcgagtacaaggccctgatgaggaaccgacgccaggacgccaggcagggctac
ctgattgcgccccaaggcactcaagtgccaccttcatcctcagatctcatgtaccagcgt
tcagttgggatgcagctggcctcaccactgatggatcactacttgccccgcggcatggag
ccaaacatgcccgtcatagtcaacacacgcagcctgaagccagaagaaggggatggggct
gaagacagtcattcggtgcctgatggggagatgtaccactacagtgaagatgaggattca
gagggcgaggacaagagcgatggcgagttggtggttctcacagactaa
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