Eublepharis macularius (Leopard gecko): 129331458
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Entry
129331458 CDS
T09084
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129331458 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129331458 (TAF4)
03036 Chromosome and associated proteins [BR:
emc03036
]
129331458 (TAF4)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129331458 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
129331458 (TAF4)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129331458 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
129331458
NCBI-ProteinID:
XP_054837998
UniProt:
A0AA97JGZ3
LinkDB
All DBs
Position
5:complement(160625635..160720068)
Genome browser
AA seq
1113 aa
AA seq
DB search
MAAGSDLLDEVFLNAEVDEKVVSDLVGSLESQLAASGHHHPHHNAQEPLRAAGGLLGNHV
VSSGGSSSSSPSPSPGGGAVGGNANAQTESPAGGATAGGTPAKMGLGGPEITKPGAGGVQ
GSVINHNARSQGSGLDGATTTNAGTAAGVQGGSEAAVAPGTLSQGKSVVISTMATALSTR
NGKIGTTAVQTLNGSNVVMNSHHSGGASFPATPVTANPAVTPAVTPLVNNGPGNVGKVNT
VNAVLPSASNTVIQTSFLGAGVSSASSPSPTVISSQQPPSIGTGGPTVALVRPPIHPAGP
SVAAATQNGSNTVINSTISVGNFPAAAVAAATVGSGVSLQTSLVNSQPGSSVPAAPAAQV
IKSESPKTIVQAVTQHQTLAAGGQPSTTGGNMIIGQTMQAGLPNVAPNPGGVPPAPPGTP
TGLAKGTANTVAQSLPRTPAATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVL
VRSENGQLLMIPQHTLAQMQAHAQSQPQTTMTPRPATPTSASSVQISTVQVSSLRNAPGT
PIIARQVAPTTIIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGSTAQTSALGTAAAVQTGT
AQRTVQAATAASTVATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGK
LEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPTTQATTT
LTAVMLNSPIQRTAGKTTATVTSTLQQPVISLTQPTQVGVGKQGQPTQVVIQQSQKPGTL
IRPPQVTLTQTPMVALRPPHNRIMLTAPQQIQLNPLQTVPVVKQTVLPGTKALSTLSTQA
AAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETF
LLPALLQRRILEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNISYKDDE
RYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQ
QQELAQMRQREANQTALAAIGPRKKRKVDSPGAGPGTEGSSASVAVPGGSGVGTTRQFTR
QRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacgctgaggtggacgagaag
gtggtgagcgacctggtcggctccctggagtcccagctggccgcctccggccaccaccac
ccccaccacaacgcccaggagcccctcagggccgcgggggggctgctgggcaaccatgtt
gtgagcagcggcggcagcagcagcagcagcccgagcccgagcccgggaggaggagcggtg
ggaggcaatgccaatgcccagaccgagagccccgccggcggcgccacggccggcggcacc
cccgccaagatgggacttggcggccccgagatcaccaagccaggagctggcggcgtgcaa
gggagtgtcatcaatcataacgccaggtcccagggctccggtctggatggggccaccacc
accaacgccggcactgctgcaggagtccaaggtggatctgaagctgctgtcgccccaggg
accctcagccagggcaaatcggtggtaatcagtaccatggcgacagccttgtctaccagg
aatgggaaaatcgggaccacggcggtgcagactttgaatgggagtaacgtggtgatgaat
tctcaccattcggggggtgcttctttcccagcaacccctgtaacagctaaccctgctgtc
acccccgctgtcacccctcttgtcaacaacggaccaggaaatgtggggaaggtaaacacc
gttaatgccgttttgccatccgcttctaataccgtcatccagacttctttccttggcgct
ggggtgtcctctgcctcttccccttcccctacagtgatctcctcacaacagcccccaagc
attgggactggggggccaacggtggcgttggtgaggccacccattcatccagcaggacct
tcagtggctgcagccacccagaacgggagcaatactgtgatcaattcaaccatcagtgta
ggaaacttccctgctgcggctgttgctgccgccaccgttgggtctggtgtttccctccag
acatctctcgtgaacagccagcctggttctagtgtgccggctgcacctgccgcacaggtc
atcaaatcggagtctcctaaaaccatcgtgcaggcagtaacccaacatcagactctggct
gctggtggccaacccagtactacagggggtaatatgataattgggcaaactatgcaagct
gggctgcccaacgtagctcctaatcctggtggggtacctcctgcacctccaggtaccccc
actggcctggctaagggcactgccaatacagtggcacagagcctgccaaggactccagca
gcaactacaagtggaatcagagcaactttgactcccactgttttagcacctcgtctgcct
cagcctcctcagaatccaacaaatatccagaactttcagttgccaccaggcatggtcctc
gtgcgtagcgagaacggccagttactgatgatccctcaacatactttggcacaaatgcag
gcgcatgcgcagtcccagcctcaaactaccatgactcctcgccctgccacgcctaccagt
gcttcttcggtccagatctcgactgtgcaggtcagttcactgagaaatgctcctggaaca
cctatcattgcacggcaggtggccccgaccactataatcaagcaagtttcacaggcgcag
acaacagtgcaacccacgacgacgctacagcggccgcctgtagttcagcctcagattgtt
ctgggtagtacagcgcagacgtcggcgttggggacagcggctgctgtgcagactggaacg
gctcagaggacggtgcaagcagccacggcggcttcaactgtggccacagaaactatggaa
aatgtgaagaaatgcaagaattttctctctacactaataaaactggcctcttctggaaag
cagtcgacagagactgccgctaatgtgaaagaactagtccagaacctgctggacggcaaa
cttgaagctgaagatttcaccagcaggctgtaccgggaacttaattcttcacctcaaccc
taccttgtgcctttcttgaagcggagcttacctgccttgagacaactgactccggactca
gcggcgttcattcagcaaagccagcagcagcagccgcccacgacgcaggccacgaccact
cttacggctgtgatgctgaacagccccattcagcgcacagcagggaagaccactgccacc
gtcacgagcaccttgcagcagccagtcatcagcctgacgcagccgacgcaagttggggtt
ggcaaacaagggcagcccacgcaggtggtaatccagcagtctcaaaaaccgggcacgttg
attaggcctccgcaagtgacgttgacacagaccccgatggtggcactgcggccaccacac
aaccgtattatgcttaccgctcctcaacaaatacagctgaacccacttcagacagtccct
gtagtaaaacaaacagtattacctggaaccaaagctctttctactctttcaacacaagca
gcagctgctcaaaaaaataaactcaaagaacccgggggaggctcttttagggatgatgac
gatattaacgatgttgcatcgatggcgggagtcaacctatcagaagagagcgcacgtata
ttggctacgaattctgagttggtgggcacgttaacaaggtcgtgtaaagacgagaccttt
ctcctcccggcacttttgcaaagaaggatactagaaataggtaaaaagcatggaataacg
gaaatccaccctgatgtagttagctatgtatcgcatgccacgcaacaaaggttacaaaac
ttggttgagaaggtatcagagactgcccagcaaaagaatatatcttacaaggacgatgaa
agatacgagcaagcaagtgatgttagggcgcagctcaagttctttgaacagcttgatcaa
atagaaaaacagcggaaggatgaacaagaaagggaaattttaatgcgcgcggcaaagtct
cgatctagacaagaagatccagaacagcttaggttgaaacaaaaggccaaggagatgcag
caacaagaactagcacagatgagacagagggaagccaaccaaactgctttggcggcaatc
ggccccagaaagaagaggaaagttgactctccaggtgctggaccagggacggagggatcc
agtgcgagcgtggcagtcccaggaggctcgggagtgggaacgaccaggcagtttacacgg
caaaggataacgcgggtgaacctcagggacctcatattttgtttagaaaacgagcgagag
acaagccattcactattgctatacaaagcattccttaagtaa
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