Eublepharis macularius (Leopard gecko): 129331734
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Entry
129331734 CDS
T09084
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03030
DNA replication
emc03410
Base excision repair
emc03420
Nucleotide excision repair
emc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129331734 (RFC4)
03410 Base excision repair
129331734 (RFC4)
03420 Nucleotide excision repair
129331734 (RFC4)
03430 Mismatch repair
129331734 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emc03032
]
129331734 (RFC4)
03036 Chromosome and associated proteins [BR:
emc03036
]
129331734 (RFC4)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129331734 (RFC4)
DNA replication proteins [BR:
emc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129331734 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
129331734 (RFC4)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129331734 (RFC4)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129331734 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
129331734 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
Mg_chelatase
DUF815
AAA_24
AAA_14
DNAX_ATPase_lid
AAA_19
Cdc6_lid
SLFN-g3_helicase
RuvB_N
AAA_28
AAA_5
TIP49_C
AAA_23
ResIII
Viral_helicase1
AAA_7
DUF1128
Motif
Other DBs
NCBI-GeneID:
129331734
NCBI-ProteinID:
XP_054838163
UniProt:
A0AA97JJM3
LinkDB
All DBs
Position
6:complement(13873927..13914630)
Genome browser
AA seq
365 aa
AA seq
DB search
MQAFLKGPSSISTKPPPTKERGTAATAGSSGEGKRVRPVPWVEKYRPKCVDEVAFQEEVV
AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVV
REKVKTFAQLTVSGSRSDGKPCPPFKIIILDEADSMTSAAQAALRRTMERESKTTRFCLI
CNYISRIIEPITSRCSKFRFKPLSDKTQQQRLLDIAEKENVTVSSEAISCLVHVSEGDLR
KAITLLQSATRLTGRKEVTEKIVMEIAGVVPKEILDELLAACQSGSFEKLEVVTKNLINE
GYAATQLINQLHDIFVEKEEFSDKQKSAIAEKLAEADKCLADGSDEFLQLISLCAVVMQQ
LTQNS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggtccctcttcaatcagcacaaaacctccacctaccaaggaa
cggggaacggctgccactgcaggaagcagtggggagggcaagagagtcagacctgttcct
tgggtggaaaaataccgccccaagtgtgtggatgaagttgcatttcaagaggaagtcgtt
gctgtgttgaagaaatccttagagggagctgatcttcccaacctcttgttctatggacct
cctgggactggaaagacatctactattttggcagcagccagagaactctttgggcctgaa
ctgttccgacagagggtccttgaattaaacgcatcagatgaacgtggaatacaagtcgtc
cgagagaaagtgaagacctttgctcagctgacagtctcgggaagccgttcagacggcaaa
ccatgccccccttttaagattataatcttggatgaagcagactctatgacgtcagcagcc
caggcagcattaaggcgcaccatggagagagaatccaaaacgactcgtttttgccttatc
tgtaattatataagcaggataatcgaacccataacatctcgatgctctaaatttcgtttc
aagcccctttcggacaaaacccaacagcagagacttctagacatcgctgaaaaggagaac
gtgacggtcagcagcgaggcaatatcttgcctagttcatgtgtccgaaggagacttgagg
aaagcaatcacgctgcttcagagtgctacgcgattaacgggcaggaaagaggttactgag
aaaattgtcatggaaattgcaggggttgtacctaaagaaatcctggatgaattactagct
gcctgtcagagtggctcatttgaaaaactagaagttgtaacaaagaatctgataaacgaa
ggatacgctgctacacagcttataaatcaacttcatgatatctttgttgagaaggaagaa
ttcagtgacaaacagaagtcggctattgcagagaaacttgccgaggcagacaaatgcttg
gcagacggttccgatgaattcttgcagttgatcagcctctgtgcggtcgtgatgcagcag
ctcactcaaaatagctag
DBGET
integrated database retrieval system
