Eublepharis macularius (Leopard gecko): 129331774
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Entry
129331774 CDS
T09084
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129331774 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129331774 (VPS8)
Membrane trafficking [BR:
emc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129331774 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
TPR_Vps41
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
129331774
NCBI-ProteinID:
XP_054838253
UniProt:
A0AA97JHF1
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All DBs
Position
6:complement(59099483..59246083)
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AA seq
1410 aa
AA seq
DB search
MEDETKMEGQNLDPDHGSCSVTDELSQQLLSQEASSPKLSVVELSKELDSKSDLIDDKEF
DIPQVDTPPTLESILNETDDEEEPFVLEDPCLLNIDNIDTHSYDTSSVASSDSGDRTHLK
RKKKHHDSFSVHGSVIRLSLLKGISAQIASAAAKVDAGLPTAIAASSLIAVGTSHGLALI
FDPNQALRLCLGSTAVGAQYGAVSALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITD
AHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIE
PLHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFV
AVQTSVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSRTVVLLD
SVEKLHVIDRQTQEELETVEVSEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISN
CGGQIFYLGTKSVHVMTLRSWRERIDHLLKQECLNEALALAWSFHEGKAKAVVGLSGDEH
KRKAVVADRMVEILIQYADRTMKKCPEQGKIQVMEQYFQDMVPVIVDYCLLLQRMDLLFS
QMYDKMSENSVAKGVFLECLEPYILSDKLVGITAQIMKDLLLHFQDKNLMANMEACIVHM
DITSLDIQQVVLMCWENHLYDAMIYVYNSGMNDFITPMEKLFKVIALPLAAGKSLSDEQV
IMGNKLLVYISCSLAGRAYPLGNIPEDLVPLVKNQVFEFLIRLHSTEAPVDEEVYPYIRT
LLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLA
RQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQM
AEKAEFYQICEFMYEREHCYDKIIDCYLRDPLRKEEVFSYIHNILSIPGYSTEEKQSVWQ
KAMKHIEELLSVSPSKAADLISVHFSDQIEQIIQNLQDQCLLFQFLKSLLDPREGINQDL
LQLSPSITEQFIELLCQYKPDQVLETLQFLEAYRLEETVQVIQKYQLPEAASYLLEKKGD
IHGAFLVMLEWLQNKLLTLTHEDKKSTEFPSLKNIEDTLAKTIALCQRNSHNLNQQQREA
LWFPLLEAMMSPQRLSNSSALCLYSDFLKNLTMQVLNNMATFIALPLILQRILQDPVYGR
GKLGEIQGLVLGMLDSFNYEQTLLETTTNLLNHDLHWSLRNLRASMARGLNPKQDYCCIC
LQQYKRRQESADQIIVFSCGHLYHSLCLLSKDCGIDSKGQMKWTCFKCNANNRSGKLNET
SLEMKKGTTVSLPQTSSESLLDPQQAQAFDQLCRLYRGTSRLALLTELSRDRGGEKHGLL
HVSQGDAALNSVFQNETFQLHLTPPPLLDE
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaacaaagatggagggtcagaaccttgatccagaccacggctcttgctct
gtgacagatgaattaagtcagcagctcttgagccaagaagcctcttctccaaagctgtct
gtggttgaactgagcaaggaactggactccaagagtgatctaatcgatgacaaggagttt
gatattccccaggttgatactcccccaacactggaaagtattttaaatgagacagatgat
gaagaggagccttttgttcttgaagatccttgtcttctaaacatagataatattgacacc
cactcctatgatacctcttctgttgctagctctgacagtggggataggactcacttgaaa
aggaagaagaagcatcacgattctttctctgtccatggatcagtaatacggctgtcactt
ttgaaaggaatttctgcacaaatagcatctgcagcagccaaggtggatgctggtttaccc
actgcaatagcagcatcaagtctcatagcagtaggaacatcccatgggctagcgttgata
tttgatcccaaccaggctcttcggctttgtttgggcagtactgcagttggagcacagtat
ggagccgtatctgctcttagtatcaacaacgattgttcaagacttctgtgtggtttcgca
aagggacagattaccatgtgggatctagccagtggaaagcttttgagatcaataacagat
gctcatcctccaggaacagcaatattacacattaagtttacagatgacccaactcttgca
atttgcaacgacagcggaggttcagtttttgagctgtcattcaagagagttatgggggta
cgaacatgcgagtcacgctgtttgtttagtggttccaaaggagaagtttgctgcattgag
ccattgcatgcaaagactgaactgagagaccatcctattacccaatactctctgctggca
atggcttctttaacaaagattcttgtaattggattgaaaccgtctttgaaagtgtggatg
acttttccatatggccgtatggacccttccagtgttccgctgctggcttggcattttgtt
gcagtgcagacatctgtgaatcctgtgcttgccttctgtcgaggagacgttgttcacttt
cttctagtaaagagagatgaatctggagcaattcatgttacaaagcaaaagcaactgcac
ctgcattatgatctcatcaattttacttggataaactctcgcacagttgtgcttctggat
agcgtggaaaaactgcatgtgatagatcgtcagacacaggaggagcttgagaccgtggag
gtttcagaagttcagttagtttacaacagcagccatttcaaatctctggcaacaggaggc
aatgtcagccaagcactggcattggtgggagaaaaggcttgttaccagtcaatcagcaat
tgtggtggtcagatcttttatttaggtacaaagtctgttcatgtgatgactttgaggagc
tggagagaacgaatagatcatcttctgaaacaagaatgccttaatgaagccttggcactt
gcttggtcctttcatgaaggaaaagccaaggctgttgtaggtttgtctggggatgaacac
aaacgaaaggctgttgttgcagacagaatggttgaaatccttattcagtatgctgatcga
actatgaagaaatgtcctgaacagggtaaaatccaagtgatggagcagtacttccaggat
atggtgcctgtcattgttgactactgccttctgcttcagcgaatggatctgttgtttagt
cagatgtatgacaagatgagtgaaaattctgtggcaaaaggtgtctttctggaatgtctt
gagccatacattttaagtgataagttggtgggaatcacagctcaaattatgaaagacttg
ctgcttcacttccaagataaaaatttaatggcaaacatggaagcttgcattgtacatatg
gacatcaccagcctagatatacagcaggttgtgctcatgtgttgggaaaatcacctgtat
gatgctatgatctatgtctacaacagcggaatgaatgattttataactcctatggagaaa
ttattcaaggtcattgctcttccacttgctgctggcaagtctctctcagatgagcaggtc
attatgggcaacaagcttcttgtttatatcagttgtagtttggcaggtcgggcttatcca
ttgggcaatattcctgaggatctggtgcccttggttaaaaaccaggtctttgaatttctt
atccgtttgcactctaccgaagcaccagtagatgaagaagtttacccctatatacgtacg
ctgttacactttgatactcgggagtttctgaatgtgcttgcattgacatttgaagacttt
aagaatgacaaacaagctgtggagtatcaacagagaattgtggacatccttctcaaggta
atggtagagaactctgattttaccccatcacaagttggatgcctctttactttccttgcc
cggcagcttgctaagcccaacaacacactgtttgtgaacaggacactatttgaccaggtc
ctcgaatttctctgcagtcctgatgatgattcacgacactctgaaagacagcaggttctt
ctagaattgctccaagctggaggcatagtacagtttgaagagagcagactcattcaaatg
gcagagaaagctgaattctaccaaatttgtgaatttatgtatgaacgtgaacactgctac
gacaaaatcattgattgctatttgcgtgatccattgagaaaggaagaagttttcagctat
atccataatatactctccattcctgggtacagtacagaagaaaagcagtctgtgtggcag
aaagctatgaaacacattgaggagctgctatcagtgagtccctccaaagcagcagatctg
atttctgttcacttcagtgaccaaattgaacaaatcattcagaacttgcaggatcagtgc
ttgctttttcagttcttgaagagtctgcttgacccaagggaaggtatcaatcaagacttg
cttcagctctctccctccattactgaacagtttattgagttgctgtgtcaatataagcct
gaccaggttttagagactttacagttcttggaagcctacagactggaagagacagttcag
gttatccagaaatatcagctgcctgaagctgcttcttatctgcttgagaagaaaggagat
attcacggtgccttcttagttatgcttgagtggctacaaaataagttgttgacacttaca
catgaagataaaaagtcaacagaatttccttccttaaagaatattgaagataccttagca
aaaacaatagcactttgccagagaaattcacacaatttgaatcagcagcagcgagaggca
ctgtggtttccactcttagaagctatgatgtcgccgcagaggttatctaattcttctgcg
ctgtgcctttattctgactttttgaagaatttgacaatgcaagtgctgaacaacatggca
actttcattgccctaccgttgattttgcagagaattctacaggatccagtctatggtaga
ggaaaactcggagaaattcagggtcttgtgctaggcatgctggacagctttaactatgag
cagactcttcttgagacaacaactaacctactcaaccatgacctccactggtctttacgt
aatttgagagcatctatggctagaggtctcaaccccaaacaagattactgctgtatttgt
cttcagcaatataaaagaagacaagagagtgctgaccaaatcattgtcttcagctgtggt
cacttgtaccactctctctgtctcctaagtaaggactgtggcattgattcaaagggacag
atgaagtggacttgttttaaatgcaatgcaaataacagaagtgggaaactcaatgagact
tccttggagatgaagaaggggaccacagtatctttgccacagaccagttcagagtccctt
ttggatccccagcaagctcaagcttttgaccagctctgtcgtctgtatagagggacatcc
aggttggctcttctaactgaactctctcgagatcgtggtggtgaaaaacatggactcctc
catgtctcccagggtgatgctgctctgaacagcgtctttcagaatgagaccttccagctt
cacctcactcctcctccacttctggacgagtaa
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