Eublepharis macularius (Leopard gecko): 129331803
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Entry
129331803 CDS
T09084
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emc03041
]
129331803 (DDX1)
03016 Transfer RNA biogenesis [BR:
emc03016
]
129331803 (DDX1)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129331803 (DDX1)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129331803 (DDX1)
Transfer RNA biogenesis [BR:
emc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129331803 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129331803
NCBI-ProteinID:
XP_054838326
UniProt:
A0AA97JJ00
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All DBs
Position
1:complement(46302529..46331098)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCHDQGLCRVGWSSAQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHLKNQAIFASCVLKNAELKF
NFGEEDFKFPPKDGYIALEKAPEGCAVKSEHAGSAQVAQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKNVDNPKLRELLIIGGVAAREQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLTQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKAWERLGKNHIRTDEVHAKDNTRPGAN
SAEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQRRAAGGGSYKGHVDILAPTVQELATLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttttcggaaatgggtgttatgccagagatagctcaagctgtagaagagatg
gactggcttcttccgacagatatccaagcagaatctatcccattgattttaggaggtggt
gatgtacttatggctgcagaaactgggagtggaaaaactggtgcattcagcatcccagtt
attcaaatcgtttacgaaactctgaaggaccagcaggaaggcaaaaagggaaaaaccact
ataaaaactggcgggggagtgctcaacaaatggcagatgaatccatatgatagaggatct
gcatttgcaattgggtctgatggcctctgttgccaaagcagagagataaaggaatggcac
ggatgtaggtcaaccaaaggcgtgactaaagggaaatattactatgaagtgtcctgtcat
gatcaggggttatgcagagttgggtggtcctctgcgcaagcttcattagacttgggcact
gacaaatttggcttcggctatggcggaaccggaaagaaatctcacaacaaacagtttgat
agttacggggaggaattcactatgcatgacacaataggatgctatctagatatagataaa
gggcagatcaaattttccaaaaatggaaaagaccttgggctcgcatttgaaattccacca
caccttaagaatcaagcaatcttcgcatcttgtgttctcaagaacgctgaattaaaattc
aactttggtgaagaagacttcaaatttccaccgaaagatggatatattgctctcgaaaag
gctcctgagggctgcgctgtgaaatcagagcacgcaggaagcgcgcaggtagcccaaacg
aagaatctcccaaatgctcccaaagccttgattgtggagccatccagagagttagctgaa
caaacgctgaacaatgtgaaacagttcaaaaaaaatgttgataatcctaaactaagggaa
ctcctaattattggtggtgttgctgcaagagagcagctctccattttggagcaaggggta
gacattgttgtgggaacccctggaaggctggatgatctcgtgtcaactggaaaattgaat
ttgtctcagattagattcctggttcttgatgaggctgatggcctcctcacccaaggttat
tcagacttcatcaacagaattcattctcagattcctcagataacttcagacggaaagagg
ctgcaggtcattgtgtgctccgcgacgcttcattcgtttgacgtgaagaagctgtcagag
aagatcatgcacttccccacttgggttgacttgaaaggagaagattctgtcccagagact
gtgcaccatgttgtggttcctgtaaacccgaaaactgacaaagcttgggaacggcttggc
aaaaaccacatccggactgatgaggtgcatgcaaaagacaacacaagacctggagctaat
agtgcagaaatgtggtcagaagcaataaagattctaaaaggggagtatgccgttcgggcc
atcaaagagcacaagatggatcaagcaattatcttctgtagaactaaaatagactgcgac
aatatggaacaatacttcatccagcaaggaggaggtccagataagaaaggacatcagttc
tcctgtgtctgcctgcatggtgacagaaaacctcatgaaagaaaacagaatttggagcgt
ttcaagaaaggagatgtcagattcttgatctgcactgatgtagctgctagaggaattgat
atcagcggtgttccttatgttatcaatgtcacactaccggatgaaaaacagaactacgtt
catcggattggcagagtaggaagagctgaacggatgggtctggctatttcccttgtggca
tcagaaaaagaaaaggtttggtatcactcgtgccccagtcgtggaaaaggttgctataat
actagactgaaggatgagggtggttgcaccatttggtacaatgagatgcagctgttgggt
gaaatagaagaacacctgaactgtaccatttcccaagttgagccagatattaaggtccca
gtggatgattttgatggcaaggtcacctatggacagaggagggctgctggcggtggaagc
tataaaggccacgtggatattttggcacctactgtacaagagttggctacccttgaaaag
gaggctcagacatctttcttgcatcttggctaccttcccaaccagctgtttagaacattt
tga
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