Eublepharis macularius (Leopard gecko): 129332072
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Entry
129332072 CDS
T09084
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129332072 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129332072 (HERC4)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129332072 (HERC4)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
HECT type E3
129332072 (HERC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129332072
NCBI-ProteinID:
XP_054838838
UniProt:
A0AA97JKT8
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Position
6:115313580..115361536
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AA seq
1051 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVLEPRKCRFFLNKNVQDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKRPEQVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGFAADGQLGFPG
TEEYIRVPRNIKSLSEIQIAQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYEFKKQTS
PQLIKSLLGIPFAQIAAGGAHSFVLTVSGAIFGWGRNKFGQLGLNDDNDRYVPFLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSTGRIYSFGLGGNGQLGTGSTSNRKSPFPVKGNWLPYSGQIPPDSDAEH
YCVKRIFSGGDQSFSHYFSPQDLVPPDDFRYPNASKQIWTVNEGFIQRLLSCSSSGPGRL
PVEIANEIDGTFSSAGCLNGSFLAISNDDHYRTSARFSGIDMNAARLLFHKLIQPEHPRI
SQQVAASLEKNLIPKLTSSFPDYEALRLFVTLPECPLMSDVNNYMTLAIPFATAIVNLEK
NPLKVLENWWSLLEPPLFLKVVELYKDVVVHLLKLNKMGIPPSEQRIFNCCLHTALRVLE
ILHRVNEKGGQIIQYDKFYIHELQDLIDIRNDYCTWLHEQSYGMLTEMPVTICTYPFVFD
AQAKTTLLQTDAYYQMQVAVEQAHRQNFSSLFVPVLGSVNPCLILVVRRENIVGDAMEVL
RKTKNIDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFSD
KTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLNKKPSLEDLKELMPDVGRSMQ
QLLDYPEDDIEDTFCLNFTITVENFGATEVKELIPNGANTSVVKQNRQEFVDAYVDYIFN
KSVASLYDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKGEYWADH
PTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLNLVIQPTGGGDEYLPVSHTCF
NLLDLPKYTDKALLKSKLIQAIDHYQGFNLV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggaaatgcctcgtttggacagcttggactggggggcattgatgaagag
gttgtactcgaacccagaaaatgtcgcttcttcctaaacaagaatgttcaagatgtaggc
tgtggactaaggcacactgtatttgttttggatgatgggactgtgtatacatgtggatgt
aatgacttaggacaattaggacatgaaaaatccagaaaaagaccagagcaggttggtgcc
ctggatgctcaaaatattgtagctgtttcatgtggagaagcccacacattagcattaaat
gacaagggacaagtctatgcttggggttttgcagctgatggacagcttggctttcctgga
actgaagaatatattagagtgcccagaaacattaaaagcttatcagagatccaaatagcg
caggttgcctgtggctattatcattcacttgcactttccaaaggaagtgaagttttttcc
tggggacagaataagcatggtcaactaggtttaggttacgaatttaaaaagcagacatcc
ccacagctgataaaatctttactgggaataccttttgcccagattgcagcaggtggtgcc
catagctttgtacttactgtttctggagctatctttgggtgggggcgcaacaaatttggc
cagcttggtcttaacgatgataatgatagatatgttccctttcttctaaagtcactaaga
tctcagaaaattgtttacatctgctgtggagaagaccacactgcagctcttacaaaggaa
ggaggggtgtttacttttggagctgggggctatggacaactgggtcacaactctactggt
catgaaataaacccaagaaaagtatttgaacttatggggagcattgtcacacagatcgcc
tgtggaaggcagcacacgtctgcctttgttccttcaactggaagaatttattcttttggt
cttggagggaatgggcagttaggtacaggatcaaccagtaacaggaaaagccctttccca
gtaaaaggaaattggcttccttatagtggccagatcccaccagattcagatgctgaacat
tattgtgtaaagaggattttctccggtggagatcaaagcttttcacattattttagtcca
caggatttggtaccaccagatgactttagatatcctaatgcttcaaagcaaatctggact
gtgaatgaaggcttcattcagagattgctgagctgttcatcttcaggtccaggaagactg
ccagtggagatagcaaatgaaatagatggaacattttcttccgctggttgcctaaatggg
agctttttagcaatcagtaatgatgatcactacagaactagtgccagattctcaggaatt
gatatgaatgctgctcgactactttttcataaacttatacagccagagcatccacggata
tctcagcaggtggcagctagtttggagaagaatcttattcccaaattgaccagttccttc
cctgattatgaagccctaagactctttgtaactcttcctgaatgtccactgatgagtgat
gtgaacaattatatgacgctagcaattccatttgcaacagcgattgtaaatctagaaaaa
aatccattgaaagtccttgaaaactggtggtctttattggagcctccattgtttctcaaa
gtagtggaactttacaaggatgttgtggtccatcttttgaaactgaataagatgggcatt
cctccttcagagcaaaggatcttcaattgctgtttacatacagccctcagagttttggaa
attttgcatagggtaaatgaaaaagggggacaaatcatacagtatgataaattctacata
catgaattacaggatttgatagacataagaaatgactactgcacctggctccatgagcag
tcttatggcatgctaacagaaatgccagttacaatttgtacttatccttttgtgttcgat
gcacaggctaagacaaccctcttgcaaacagatgcatactaccagatgcaggtggctgtt
gagcaggctcacagacagaatttctcatctctttttgtcccagtacttggatctgtcaat
ccctgtctgattttagtagtgcgcagagaaaatattgtgggggatgccatggaagtctta
aggaaaacaaaaaatatagattacaagaagcctcttaaggttatttttgtaggggaagaa
gctgttgatgcaggaggagtccgtaaagaatttttcttacttatcatgagagaactttta
gatcccaaatatggaatgtttaggtattacgaagaatccaggctcatctggttctccgat
aagacctttgaagacagtgacttgttccatctgattggtgttgtatgtgggctagcaata
tataattttactattgtagaccttcattttcccctggctttgtacaagaagctcctgaac
aaaaaaccttctcttgaagatctcaaagagcttatgcctgatgttggcaggagtatgcag
cagttgctggattatccagaagatgatattgaggatactttctgcctcaacttcacaatc
actgttgaaaactttggtgcaactgaagtcaaagagctaattccgaatggcgcaaatact
tcggttgtcaaacagaacaggcaagaatttgtggatgcctatgtggactacatcttcaat
aaatccgtggcttctctctatgatgcattccatgcaggctttcacaaagtgtgtggaggt
aaagttcttcagctcttccagcccaatgagttgcaagcaatggtgattggaaacacaaat
tacgactggaaagaactggaaaagaacacagaatacaaaggtgaatattgggcagatcat
ccaacaattaaaattttctgggaagttttccatgaattaccattggaaaagaagaaacag
ttcttgttatttttgacaggcagtgaccgtattcctattcttgggatgaagagtcttaat
cttgttatccagccaactggaggtggagatgagtatcttccagtgtctcacacgtgtttt
aatcttcttgatcttccaaaatacacagataaagcattactcaaatctaagctgatccag
gctattgatcactatcaaggtttcaatttagtataa
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