Eublepharis macularius (Leopard gecko): 129332104
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Entry
129332104 CDS
T09084
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129332104 (COL17A1)
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GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129332104
NCBI-ProteinID:
XP_054838920
UniProt:
A0AA97JJD3
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Position
6:complement(69076592..69155035)
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AA seq
1473 aa
AA seq
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MDAVKKNKRDGTEVTERLITETVTTRLTSLPPKGGGSSGLKTTAYSGGSGVEKRSYTHGS
SYVTSTGGNARMNASSSSYKQAITPSSTLPKSPGSTFERKTYTTRHATYEGSSSANSSPE
FPRKDLGSSATRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLRGSRSASASPTRSSS
NTLPIPKKAVVETKMVTESSQSVSGTYDTTILNAALPPYMWSSTLPAGSSLGSYHNNMTQ
SSSLINTAAHSTGSVFGVPNNLAPSSPTLNAGLSTSSTVFGVQNNLAPSTFAATNNGTTA
STAAYGVKKNMAQSSGVTSTGVSTSSTTAATTMSSQNDDILRKDCKFLLLEKENVAPKKE
VELLIMTKDSGKVFSASSTGLNGGYCTEDTLKKEKQAIASSYAGDAFLKSETNGGLQSVS
TKDKATYAEIQRDDGCGGAGAAPAWCPCASCCSWWKWLLGLLLAWLLLLGLLFGLIALAE
EVRKLRSRVESLESRANYLQINPDTLENVHISKVGQFAKHSSTLGDMSEEDQLWLFMKKR
LEAERNQGYFRGEPGPKGDMGIQGPKGDQGLPGPAGAPGRFGPEGPKGQKGNMGENGMEG
PMGQRGREGPQGSRGEPGPPGFGEKGDKGSAGVPGPQGPPGPPGPFGPKGMMGAPGGHGP
PGPPGLQGFRGETGVPGIKGEKGAMGPPGPKGDQGEKGPRGLTGEPGSRGPAGPTGEPGA
KGSAGPPGPDGHQGPRGEQGLMGIQGQRGPSGPPGDPGQPGLTGPQGPPGLPGTAGQPGP
KGEPGAPGRVTSTDGASTIALPGPPGPPGSVGPPGPPGVPGPVGPAGLPGAQGPRGERGP
PGESTVVEIRPETASSAAQDMTRQPGPPGPPGPPGPPGPPGASIQGPPGPPGPPGEGLPG
PRGLPGSFVPTNENFFAGPPGPPGPAGPRGEQGLPGPRGFKGEAGQPGLPGVSAHAGAGV
AIQGPPGPPGPPGPKGEAGVPGAPGIPGGAGSRVSQGPPGPPGPPGQPGLGIGSVHEIQQ
YVSEYLQRDGRYLVAPQGPPGPPGPPGIITIDEESLDYGKLARHVMNHMSALGISWTSSS
HSSSSTTIYDDLIAMLQREDVRRQLIGPPGPPGPPGMGGNGLSVSLDYDELTRRVVNYMT
SSGIGMGLPGPAGPPGLPGASYGDILALLQASEFSGIVGPPGPPGPPGVPGSSLSTLTAE
AIFTYLQSAGYSTIPGPPGPPGPPGFSGTGLESYGDSIWTDQFRSELIRYLTSDDIRGFI
RGPPGPPGPPGDGTAMSGYYRGSLNSEGSYGRSMTSDTSYDATGGYGGSVGSNGAYGGAL
GAGGSYGESLSTDGSQMRSAGAEGSYTGGSFRGPLDYNELAVRVYENIQNRGLLQDMMTY
TMQGPPGPPGPPGISRVFASYGNVTEDLMDFFRTYGTIPGSPGQKGEIGFPGPKGDIGSM
GPPGRQGPRGPKGEKGEKGEHAYGRRKRRSIGV
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtaaagaaaaataagcgagatggaacagaagtcacagagagacttatcaca
gaaactgttaccaccagactgacatctcttcccccaaaaggaggtggtagcagtgggctc
aaaacaacagcatacagtggtggaagtggagtggaaaagaggagttacacccatggcagc
agttacgtcacatctacaggtggaaatgctagaatgaatgcctcctcttcctcctacaag
caagctatcactccttcctctactctccccaaatcacctgggtcaacgtttgagcgaaaa
acctataccacccgtcatgcaacatatgaagggagctccagtgcaaattcatctccagag
tttccaagaaaagatttgggttcctctgctaccagagggcgaagccaaacccgagagagt
gaaatacgagtgaggctgcagagtgcttctccgtcaaccaggtggacagaactggatgat
gttaagagacttcttcggggaagtcgctcagcaagcgccagcccaacacggtcctcatca
aacacactccctatacccaagaaagcggttgtggaaaccaaaatggttacagagagttcc
cagtcagtgtcaggaacatacgacacaaccattttgaatgctgctctcccaccatacatg
tggtcctccaccctgcctgcagggtcatcgcttggcagctaccataacaacatgacccag
agctcatcgctgatcaacactgcagctcattctactggatcagtgtttggagtcccaaac
aatctggctcccagctcccccactctgaatgcaggcctcagcacttcttcaacagtgttt
ggtgtccaaaacaacctggctccaagcacatttgctgccaccaacaatggaactacagcc
tccacagcagcatatggagtaaagaaaaatatggcccagagctctggtgtgactagtact
ggtgtgtccacctcttctacaacagctgccaccaccatgagctcccagaatgatgacatc
ctgcgcaaggactgcaagttcctgctcctcgagaaagagaacgtagctcccaagaaagag
gtggagctattgatcatgacaaaggacagtgggaaagtgtttagtgcatccagcactggt
ctcaatggaggttattgtacagaagataccttgaagaaagaaaaacaggctattgcttca
tcttatgcaggagatgccttcctgaaatcagaaacaaatggaggtctacaatctgtttcg
acaaaggacaaagccacctatgcagaaatccaacgtgatgatggctgtggaggggcaggg
gcagctccagcctggtgcccttgtgcctcctgctgcagctggtggaaatggctccttggt
ttgctcctggcctggctccttctgcttggtctgctttttgggcttattgctctggcggag
gaagtgagaaagctgagatctcgtgtggagagccttgaatcccgtgccaactacttgcag
attaatcctgatactttggaaaatgtacacatcagcaaggttggacagtttgccaaacac
tcatcaactctgggtgatatgagtgaagaagaccagctatggctattcatgaagaagagg
ctggaagcagaaagaaatcaaggttatttccgaggcgagccgggacccaaaggtgatatg
ggcatccaaggaccaaaaggagaccaaggacttcctggcccagcaggtgctccaggtcgc
tttgggcctgaaggcccaaaaggacaaaaaggcaacatgggtgaaaatggcatggagggg
cccatgggacaaagaggaagagaaggacctcaaggctctcgtggggaacctggtccacct
ggatttggagagaaaggagacaaaggttctgctggagttccaggacctcaaggtccccca
ggtcccccaggtccttttggccccaaaggtatgatgggtgcacccggtggccatggtccc
cctggtcctcctggtcttcaaggattcagaggtgaaacaggtgttccaggtattaaaggt
gagaaaggagccatgggaccacctgggcctaaaggtgatcaaggggagaaaggacctcgt
ggtcttacaggtgaacctggttccagagggccagctggacctacaggtgaaccaggagct
aaaggatcagcaggtccacctgggccagatggacatcaaggccccagaggagagcaaggt
cttatgggaatacaaggacaacgaggtccatctgggcctcctggagacccagggcagcca
ggtctcacaggaccacaagggccaccagggctcccagggactgcaggtcaaccagggcct
aaaggtgaacctggagctccaggccgggttactagtactgatggggcatcaactattgct
ctcccaggacctccaggcccaccaggcagtgttggaccgccaggcccacctggagtccca
ggtcctgtaggcccagctggtcttcctggagctcaaggccctcgtggtgagagaggacca
ccaggtgaaagcactgttgtggaaataagacctgaaactgcttcttcagctgctcaagat
atgaccaggcaacctgggccacctggaccccctggacctcctggacccccaggcccacca
ggagcttctattcaggggccaccaggaccccctggcccaccaggagaaggcttaccagga
ccccgaggcctaccaggatcctttgtgcccacaaatgaaaacttctttgctggcccacca
ggcccaccaggccctgccggaccaagaggagaacaaggattgccaggtccacgaggattc
aaaggtgaagcagggcagcctggtctcccaggagtctctgcacatgcaggtgctggagtt
gccatccaaggaccacctggacctcctgggccacctggtcccaaaggtgaagcaggtgtt
ccaggagcccctggcatccctgggggagctggatcaagagtttctcagggtcctccaggt
cccccaggccctcctggacaacctggcctaggaattggttcagtgcatgaaattcagcag
tatgtctctgagtacctgcagagggatgggcgttatctggttgcacctcaaggcccacca
ggtcctccaggtcctccaggaattattaccattgatgaagaatctttggactatggcaag
ttggcccgtcatgttatgaaccacatgtctgctttaggtatctcttggacatcttcttcc
cattcatcctcttcaacaacgatttatgatgatctcattgccatgctacagagagaggat
gttcgtcgacaactaattggaccgccaggtccccctgggccacctggaatgggaggaaat
ggcttatccgtgtcactggattatgatgaattgaccagacgggttgtcaactacatgaca
agttcaggaattggcatggggcttcctggtcctgcaggtcctcctggtctgcctggagca
tcttatggagacatcttagcgttgctccaagcttcagagttcagcggcattgttgggcca
cctggtcccccaggcccaccaggtgttccaggcagctctctgtccaccctcacagcagaa
gctatcttcacatacttgcaaagtgcagggtattccacaattcctggaccccccgggcca
ccaggacccccaggcttttcaggaactggccttgagtcttatggtgacagtatttggact
gatcagttcaggagtgaattgatccgataccttaccagtgatgacatacgtggttttatc
agaggtcctcctgggccaccaggaccacctggagatggaaccgctatgtctggatattac
agagggtctctaaattcagaaggatcatatggcaggtccatgacttcagacacatcttat
gatgccacagggggatatggtggttcagtgggaagtaatggagcatatggtggtgcactt
ggagcaggtggatcttatggtgaatcactgagcacagatggatcacagatgagatctgct
ggggcagaaggatcatatactggtggatcatttcgtggaccattggattacaatgagttg
gcagttcgagtgtatgaaaacatacagaacagaggactcctccaggacatgatgacttac
accatgcaaggaccccctgggcctccagggccgcctggcatcagcagggtgtttgcatcc
tatggaaacgtcactgaagacctcatggatttcttcagaacttatggaactattccaggc
tcacctggacagaaaggcgagatagggttcccaggacccaaaggtgatattggatcaatg
gggccaccgggtcgccaaggcccaagaggaccaaagggtgaaaaaggcgagaaaggtgaa
catgcatatggacgaaggaaaaggagaagcattggggtctaa
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