Eublepharis macularius (Leopard gecko): 129332458
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Entry
129332458 CDS
T09084
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129332458 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129332458 (TAF5)
03036 Chromosome and associated proteins [BR:
emc03036
]
129332458 (TAF5)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129332458 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
129332458 (TAF5)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129332458 (TAF5)
STAGA complex
129332458 (TAF5)
TFTC complex
129332458 (TAF5)
SAGA complex
129332458 (TAF5)
SLIK complex
129332458 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
CDK5RAP3
Cytochrom_D1
eIF2A
RAB3GAP2_N
VPS8_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
129332458
NCBI-ProteinID:
XP_054839572
UniProt:
A0AA97JJK9
LinkDB
All DBs
Position
6:68272294..68290729
Genome browser
AA seq
792 aa
AA seq
DB search
MAALPEEPAEAVTVKPDPDGGAPPPPPQSQSPANAAPAPPPPSATAAPLTDGEAGAGAPD
SKPPVVPNAVPAASQQPTDRQMLLAVLQFLRRSNLRESEEILRRECRLLAEELAADPSPS
ALGGQAAHGGEGQEPSLGISVPGAGEVLLSSVTFGQSGGTVAPAAVTAPPAAPLGPSGKV
GVLMEDQPDVSAVLSAYNQQGDPALYEDYYSGLKHFIECALDCHRAELSQLFYPLFVHMY
LELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNETMLDFRTSKFVLR
ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREAN
KAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSMGSKSKKQDPNAPPQNRIP
LPELKDSDRLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAVDITDDSSMIVGG
FADSTVRVWSVTPKKLRSVKSAGDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYG
TSFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRV
ARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGH
KGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTETIYALRFSRDGEILAS
GSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRR
NLLLSAGAYSPQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgcctgaggagccagccgaggcggtaacggtgaagccagaccctgacggc
ggagctccaccgcctccgccccaatcccagtccccagcaaatgccgcccctgctcctcct
cccccctcagccaccgcggctcccctcacggatggggaggctggcgcgggcgcccctgac
tcgaagcccccggtggtccccaatgctgtaccggccgcctcccagcagcccaccgaccgg
cagatgctgctggcggtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggag
attctccgccgggaatgccggctgctcgctgaagagctcgcggcggatcccagtccctcg
gcgctcggaggacaggcagcccatggcggggaagggcaggagcccagcctcgggatctcg
gtccccggagctggggaggtgctgctcagctccgtcacctttggacagtccgggggtacc
gtcgcccctgcagctgttacggctcctcctgctgcgcccttgggaccctccgggaaagtt
ggtgtccttatggaagatcagccagatgtgagtgcagtgttgtctgcctacaaccagcag
ggagacccagcgctctatgaagactattacagtggactgaaacacttcattgaatgtgct
ctggactgtcatcgagctgagctatcacaacttttttatcctctctttgtgcacatgtat
ttggagctagtctacaatgggcatgaaaatgaagcaaagtccttctttgaaaagtttcat
ggggatcaggagtgttattaccaggatgacttgcgcgtattatcaagtttaaccaaaaaa
gagcacatgagagggaatgagacaatgctggattttcgaacaagcaagtttgtgctgcgc
atttcccgtgattcttaccagctcttgaaaagacaccttcaggaaaaacagaacaatcag
atctggaatattgttcaagagcatctttacattgatatctttgatggcatgcctcgcagt
aaacaacagatcgatgctatggtaggaagcctggcaggcgaggcaaaacgggaggctaac
aaagctaaggtcttttttggcttactaaaagaaccagaaattgaattacctttggatgat
gaagatgaagaaggggaaaatgaggagggtaagccaaagaagaagaagccaaaaaaagac
agcatgggatcaaaaagtaaaaagcaagatccaaatgctcctcctcagaacagaatccct
cttcctgagctaaaggattctgacaggctggataaaataatgaatatgaaggaagccact
aagcgtgtgcgtcttggcccagactgcttgccctctatctgtttctacacattccttaat
gcttaccagggcctaacagcagtggatattacagatgactctagcatgattgtgggaggt
tttgctgactccactgtcagagtatggtctgtgacacccaaaaaactacgtagtgtaaag
tcagcaggagatctcagcctcatagataaagaatctgatgatgttttagaaaggatcatg
gatgagaaaacagcaagtgagttgaagattttatatggtcacagtggacctgtgtatggt
accagcttcagccccgataggaactatttgttatcatcttcagaggatggcacaatcaga
ctatggagtctcttaactttttcttgccttgtgggatacaaaggacacaactaccctgtg
tgggacacacagttctctccctatggatattactttgtgtctggcggtcatgacagggtg
gctcgcttgtgggcaacagatcactaccagcctttgcggatttttgctggtcatcttgcc
gatgtcacatgtacacgttttcacccaaattccaactacgttgctactggctcagcggat
aggactgtgcggctatgggatgttctcaatggaaattgtgtgagaatttttacaggacat
aagggaccggttcattcattagcattttctcctaatggaagattcttggcaactggagct
acagatggaagagtgcttctctgggatattggccatggtttgatggttggggagttaaaa
ggacacacagaaacaatctatgcactcaggttcagtagagatggagaaattttagcatca
ggttcaatggacaacacagtgaagttgtgggatgctgtgaaagcttttgaggacttagaa
acagatgattttactacagccacaggacatataaacctgcctgaaaactctcaagacttg
ttgttaggtacatacatgaccaaatcaacccctgtcatacatctccatttcacccgtaga
aatctgcttctttctgctggggcgtatagtccacaatga
DBGET
integrated database retrieval system
