Eublepharis macularius (Leopard gecko): 129332639
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Entry
129332639 CDS
T09084
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129332639 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129332639 (DHX36)
03012 Translation factors [BR:
emc03012
]
129332639 (DHX36)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129332639 (DHX36)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129332639 (DHX36)
Translation factors [BR:
emc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129332639 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_14
NPHP3_N
NACHT
Ntox8
Sir1
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129332639
NCBI-ProteinID:
XP_054839849
UniProt:
A0AA97JMJ1
LinkDB
All DBs
Position
6:33548674..33576876
Genome browser
AA seq
992 aa
AA seq
DB search
MSYERRRDWSRGGGGPRSSQSSSSSAGRGGGGGRGGGGGGRERPPPHLKGREIGLWYARR
QGEKSKEAERQQRAVVHMDEHREEQIVQLLNTVQNKNEKDQEAMSWWSDEEGYTKEPPAK
PKPVVEKKTVVEKAPEKTRPILGKTFLDRDSEYLLEENKPDIGLDEQLKEELEKKKSDSR
YIEMQKFREKLPSYGMRKALVSLINSSQVTVISGETGCGKTTQVTQFILDDYIERRKGSS
CRIVCTQPRRISAISVAERVAAERAEVCGNGKSTGYQIRLESRLPRRQGSILYCTTGIVL
QWLQSDKLLSSVSHVILDEIHERNLQSDVLMTIIKDLLTVRLDLKVILMSATLNAEKFSE
YFDHCPMVHIPGFTYPVKEYLLEDVIEKLRYVPENADQRPHWKKRFMQGHISRPEKEEKE
EIYHERWPDYLKQLTGRYSESTIEALGMMDDDKIDLDLIAALIRHIALEEEHGAILVFLP
GWDNISTLHDLLISQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPYGVRKIVIATNIAET
SITIDDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYN
GLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKLMDPPSRDAVLLSINHLMQ
LNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG
KEKVADARRKELSKNSKSDHLTVVNAFQGWEEAQRRGFRCEKDYCWEYFLSSNTLQMLRN
MKGQFAEHLLAAGFVSSRSPKDSKSNINSDNEKLLKAVICAGLYPKVAKIRANFSKKRKM
VKVSTKTDGTVYIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGD
ISIQKDKDQDTIAVDEWIVFQSPSRIAQLVKDLKKELDDLLQEKIENPHPVDWNNTKSRD
TAVLTAIIDLITTQENETARNFAPRFQNERYS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgagcgccgccgggattggagccgcggtggcggcggccctcgctcttcccag
tcgtcctcttcgtctgcaggccgcggcggcggaggaggaagaggcggtggcggcggcggc
cgggagcggcctcctcctcacctgaagggccgggagattggcttatggtacgcgcggagg
cagggcgagaagagcaaggaggccgagaggcagcagagagctgtggttcatatggatgaa
catagagaagagcagattgtacagctgctgaacactgtccagaacaaaaatgaaaaagac
caagaagccatgtcctggtggtctgatgaggaaggatacacaaaggagcctcctgcaaaa
ccaaaaccagttgtggagaaaaaaactgttgtggagaaggctcctgagaaaacaagacca
atcttggggaaaacattcctagatcgagattcagagtatctcttagaagaaaataagcca
gatattggtttagatgagcaactcaaagaagaattggaaaagaaaaaatctgattccaga
tatattgaaatgcagaaatttcgtgagaaactgccttcttatgggatgagaaaggcactc
gtaagccttataaacagtagtcaggtaaccgttataagtggtgagactggttgtgggaag
acaacccaagttactcagttcattttggatgactatatcgaaagaagaaaagggtcttcc
tgcaggattgtgtgtactcaaccaaggaggatcagtgctatctctgtagcagagagagtt
gcagcagaaagggcggaagtctgtggtaatggaaaaagcaccggatatcagattcgactt
gaaagccggttaccaaggagacaaggttcaattctgtactgcacaactggaattgtcctg
cagtggctccagtcagacaagctgttgtccagtgttagtcatgtaatccttgatgaaatc
catgagagaaatcttcaatcagatgtcttaatgacaattattaaagatctcctaactgta
cgcctcgacctcaaagtaatactaatgagtgcaacattgaatgccgagaagttttcagaa
tattttgatcattgtcctatggtccatattcctggattcacctaccctgttaaggagtac
cttttggaagatgtaattgagaagctacggtatgttccagaaaatgcagatcagagacca
cactggaaaaagaggtttatgcaaggacacataagcaggccagaaaaggaagaaaaagaa
gaaatctatcatgagcgatggccagattatttaaagcaactaacaggaaggtattcagaa
agtacaattgaggcactgggaatgatggatgatgataaaattgaccttgacttgattgct
gcactgataagacatattgctcttgaggaagagcatggtgcaatactagtatttctgcct
ggatgggacaacattagtactttgcatgacctgctgatatctcaagttatgtttaaatca
gatagatttgttatcattcctttgcattcattaatgcctactgttaatcagacccaggtt
ttcaaaaagaccccctatggagttcgtaaaattgtaatagctaccaacattgctgaaact
agcatcactatagatgatgtagtatatgtaatagatggtggaaagataaaggaaactcac
tttgatacacagaacaacataagtacgatggcggctgagtgggtcagtaaagcaaatgcc
aagcaaaggaaaggcagagcaggaagagtccagccaggtcactgctatcatttgtacaat
ggcctgcgtgccagtctgctggacgattatcagttgccagaaatcctgaggacacctttg
gaggaactttgtttacaaatcaagattttgaagcttggaggaattgctcattttctgagt
aagctaatggatccgccatctcgggatgctgtgttgctgtctataaaccatcttatgcag
ctgaatgctttggataggcaagaagaattaactccccttggagtccatttggcacgattg
ccagtggagccacacattggaaaaatgatcctctttggagcattattctgttgcttggat
cctgtcctcactattgcagccagcctcagcttcaaggacccatttgtcattcctctgggt
aaggaaaaagtagcagatgcaagaagaaaggaactctcaaagaactctaaaagtgaccat
ctcacagttgtgaatgccttccagggatgggaagaagcccagcgccgtggcttcaggtgt
gagaaggattactgctgggaatattttctttcttcaaatacattgcagatgttgcgtaac
atgaaagggcaatttgcagaacatctccttgccgctggatttgtgagtagccgaagcccc
aaagattccaaatccaatattaactcagacaatgagaagttactcaaagccgttatatgt
gctggtttatatccaaaggttgcaaagatccgagcaaacttcagcaaaaaacggaaaatg
gttaaagtttcaactaaaacagatggaacagtgtacattcatcctaaatctgtcaacgtt
gaagagacagaatttcattacaactggcttgtttatcacttgaaaatgaggacaagtagt
atatacctgtatgattgcacagaagtttcgccgtactgtttattgttctttggaggagac
atttctatccagaaggataaagatcaggataccattgctgtggatgagtggattgtcttc
cagtctccctcgagaatagcccagttagtgaaggatttgaagaaagaattggacgacctt
ttgcaagagaaaatagaaaacccacaccctgtggactggaacaatactaaatcaagagac
actgctgtgctgacagccattatagacttaatcacaacacaggagaatgaaacagccaga
aactttgcccctcgtttccagaatgaacgatacagttaa
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