Eublepharis macularius (Leopard gecko): 129333220
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Entry
129333220 CDS
T09084
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emc04515
]
129333220 (PCDH12)
Cell adhesion molecules [BR:
emc04515
]
Cadherins
Protocadherins
129333220 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129333220
NCBI-ProteinID:
XP_054840705
UniProt:
A0AA97JMM9
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All DBs
Position
7:1340794..1346636
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AA seq
1117 aa
AA seq
DB search
MLLVLYVPVLWWSFLLLVDCQEVTTFTVQYQVLEEAQPGTVLGRLPEELGWTEGSWTAGS
FQLLQPSAPLPIQMDSQGGLLRTLGRLDREQLCPQRDRCAISFSVLVARYQALIHVEILV
LDINDNGPQFPQKALELEIPESALLQTRIPLDRATDPDTGLNGLCSYLLSPSKHFALEVT
VGSDGTQQVELVVVKEVDRELYSSFLLTVTAVDHGQPPRSGTAFVRVTVLDSNDNSPTFS
QSSVTVEIREDALLGALLVNLTATDPDQGPNGEIEYSLSKHTSADVLKTFTIESRTGRVL
LQQRLDYEKKTTYQVDVQAQDRGANPIPAHCKLLVRVLDVNDNRPDVHVIWAGQSPAVSE
AQPKDSFIGLVELSDPDSGDNGKADCRISQGGEHFYLRRINLSSYMLLTNAPLDRESRAE
HSLTLSVQDRGAASLEATRNFTVHVGDINDNAPCFEANLYHVSVAENSLPPSALLAVRAH
DADAGLNGKVTYRIPDAVISEWLAIDAGTGEIWIRTPFDAEKMAGFDFIVTAEDAGQPPL
STNVSVRVTVLDVNDNPPVVIQPEVKGGRARVTVLVDTHTGQVLWPEGEVGSESAPSASP
PLLFAVSATDADSGVNGALLYNMVSSSAPGSCILDPQSGRVYLNSSNVSSLVGHEWDLEL
SVSDRGENPLCTRVLVKVVFDSHCEHMPDSFPASQPLSPSALVGICLVALLALFLVSLTL
ALSLCKREKHGNTTYNCREAEHAYSQQQPKKPPKPIQKSDIHIVPMLQRGETERQQPGLE
TSQETAWLATPEIPCHMTPTLYRTLRNQRHPSLLTEQSERFILPAMLDVSKPRHAQKLKI
PSATAIQLTEASPCVSSWPKDLLLETAPQPQGRPGPEAAGQGESCSHRCLLRSLVRLSMA
ALAEQGTAGPLLTPESLPVQQISQLLSLLHQGQVQPKPNHKGNKYTAKHACCRDASPQAE
GLVGKNGCGSKQRDLALLELGDLLDSPSGLDLDQLAETDPAWMARLSLSLSADYKANIVS
PGALQFPASPEATGRAEPHTFATFGKAAGDEPAPAEPKLAHTFLTEMSTLLEIILSQQAN
AQADVPVGGLWRKLSMCTRTLELEGEGGKAATSKMVV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcttttggtgttgtatgttccagttctctggtggtcttttttacttttggtggactgt
caggaagtcactaccttcaccgtgcagtatcaggtgctggaggaagcacagcctgggact
gtgttgggaaggctgcctgaggaactgggctggaccgaaggtagctggactgcaggatcc
ttccagctgctgcagccgtccgctccgcttcccatacagatggactctcagggagggttg
ctacgcaccttggggaggctggacagggagcagctctgccctcagagagaccgctgtgcc
atctctttcagcgttttagtggccagataccaggccctgatccatgtggagattctcgtc
ttggacatcaatgacaacgggcctcagtttccccaaaaggcactggagctggagatacca
gaaagtgcactgttacagacacgaatccctttggatcgagccaccgacccagacaccggc
ttgaacggcctctgctcctacctcttgtcacccagcaagcattttgccttggaggtcacg
gtcggctcggatggaacccagcaggtggagctggtggttgtgaaagaagtggaccgagag
ctctactcctctttccttttgacggtgactgctgtggatcacggccagccccccagatcg
gggactgcctttgtgagggtgaccgtgctggactccaatgacaatagcccgaccttcagc
cagagttctgtgacggttgagattagggaagatgctttgctgggggcccttttggtcaac
ctcactgccacagatcctgaccaaggccccaatggagagattgaatattccctcagtaaa
cacacttctgcggatgtgcttaaaacatttactattgagagccggaccggccgcgtcctc
ttgcagcagcggctggattatgagaaaaaaacgacctatcaggtggatgtacaagcccaa
gaccgtggcgctaatcccatcccagcccactgcaagcttttggtccgtgttctggatgtc
aatgacaacaggcctgatgttcacgtaatctgggccggacagtcaccagcggtgtcagaa
gctcagcctaaggacagctttattgggctcgtggagctttctgatcccgattcaggcgat
aatgggaaggcggattgccgcatcagccaagggggtgagcatttctacttgagaaggatc
aatctcagcagctacatgttgctcaccaatgcccccctggacagggagagcagggcggag
catagcctgaccttgtcagtccaggaccgaggggcagcgtccctggaggcaaccaggaat
tttacagttcatgttggcgatatcaatgacaatgcgccctgctttgaagcaaatctgtat
catgtttctgttgctgagaacagcctgcccccttctgcattgctggcagtcagggctcac
gatgcagatgcaggcctcaatgggaaagtcacgtaccgtatccctgacgcagtgatttcg
gagtggctggctattgatgctggcactggggagatctggatccgtacaccttttgatgcg
gaaaagatggccggctttgactttatcgtaacagccgaagatgcaggccagcctcccttg
tcgaccaatgtttctgtgagggtcactgtgctggatgtgaatgacaaccccccagttgtc
atacagccagaggtgaagggggggagggcaagggtgactgtccttgtggacacacacact
ggtcaggtgctgtggcccgagggagaggtgggttctgagtcggccccttcagccagccct
cccttgctctttgccgtctctgcaacagacgcagactcaggcgttaatggagcattgctt
tacaacatggtgagcagcagtgcgcccggctcgtgcatccttgatccccagtcagggcga
gtttacctgaacagcagcaacgtcagcagcctggtgggccacgaatgggacctggagctg
tctgtgagcgatcgaggggaaaatccgctctgcacccgagtcctggtgaaggtggtgttt
gacagtcactgtgagcacatgccggattctttccctgcgtctcagcccctcagtccctct
gccctcgttgggatttgcctggtggctttgcttgctctcttcctggtcagtttgacactg
gctctctctctttgtaaaagggagaaacatggcaacacgacatacaactgccgggaggca
gaacacgcctacagccagcagcagccaaagaagccccccaaacccattcaaaaatcagac
attcacatcgtgcccatgcttcagcgaggagaaacagagcgacagcagcccggattagag
acttctcaagaaactgcttggcttgccaccccggagattccctgccacatgaccccaact
ctgtacaggaccctcaggaaccagagacatcccagcctcctcaccgagcagagtgagaga
tttattcttcctgccatgcttgacgtttccaaacctcgccatgctcaaaaactcaaaatc
cccagtgctacagccatccagctgactgaggcaagcccgtgtgtctcctcctggcccaag
gatctcttgctagaaacagccccacagccccagggcaggcctggccccgaggcggcaggc
caaggcgagtcttgcagccaccggtgcctcctgaggagcctggtgcggctgtccatggca
gctcttgccgaacaaggcaccgcagggccgctgctgaccccggaatccctccccgtgcag
caaatctcgcagctgctgtctcttctgcaccagggccaagttcagccgaaacccaaccac
aaaggcaacaaatacacagcgaagcacgcctgctgcagggacgccagcccacaggctgag
gggcttgtcggcaagaacggctgtggcagcaagcagcgggacttggcgctgttggaatta
ggggacctcctggattcgccgtcagggctggacctggaccagctggcagaaacagatccg
gcctggatggccaggctctctctttccctctccgccgactacaaggctaacattgtctct
ccaggtgctctgcagtttccagccagcccggaagccacgggcagagcagagcctcacact
tttgcgacctttggcaaagctgccggggacgagccggccccagcggagcccaagctggcc
cacaccttcctcacggagatgagcaccctgctggaaatcattctgtctcagcaggccaac
gcccaggcagacgtgcccgtggggggtctctggcggaagctctccatgtgcaccaggacc
ttagagctggagggagagggggggaaggctgcaaccagcaagatggtggtgtga
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