Eublepharis macularius (Leopard gecko): 129333388
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Entry
129333388 CDS
T09084
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emc04040
]
129333388 (TRPA1)
Ion channels [BR:
emc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129333388 (TRPA1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129333388
NCBI-ProteinID:
XP_054840984
UniProt:
A0AA97JQ52
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Position
7:complement(97200542..97258747)
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AA seq
1114 aa
AA seq
DB search
MKRSLAKLFQSGEKNRCTSYEGVVCESDAASVASQDVFKVISDGSACRLRSFIKKNRDGL
NKVDDLNATPLHHAAGQGQLESMQMIIEGSSVEALNVTDSSGNTPLHWATKKKQAESVKL
LLSRGANPNILNSGMMAPLHLAVLSLQNEIVKILAEHSITDVNLEGEGGNTPVLVACYKD
NAEALKILIENGGKICKANSIGCMPVHAAAFSGAKPCMEILIKKGEELGYCAETHINFIN
HGRCSPLHLAVQSGDLEMIKMCLEYGAQVDLKQNDKCTALHFAATQGATEILKLMMSSYK
GEDSIVNALDGNKETLLHRTALFDHYELAEYLISMGAKIDCVDVEGRTPLLLATSCASWK
IVNLLLSKGANVELKDHLGRNFLHLTVLHPGGLQHLNEKFLQMKHIKDLVTDEDNEGCTP
LHYACRQGVPLSVNNLLGLNVSIYSKSRDKKSPLHFAASYGRINTCHRLLRDMGDTRLLN
EGDRKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDFKGWTALHHAAFGGYTRTMRIILDT
NVKCTDKEDEDGNTALHLAASEGHAKAVRMLLDDGAKILLSKADASFLHEAIHNGRKDVV
NVVILHKRWEESMKTFSHHSSTNKCAILEMVEYLPECFKLVLDNCIIESSEEKTSRDFCV
EYNFRYLQCPLNLTKKLKEDDDIIYEPLITLNAMVRHNRVELLSHPVCKEYLLMKWMAYG
FRAHLMNLGVYSLGLIPLTILITHIEPGIYFNGTKNHPGPFDNKKSYFIKVCMCLVFIMS
VLGICKEIIQLFQQKLRYLLDYSNLLDWTIHSTSIIFVSSLFINIDQAALQWECGAIAIF
LSWMNFLLYLQRFENYGIYVVMFWEILRTLLRIAVVFFFLVLAFGLSFHVLLGSQQPFSS
PHLSVMQTFAMMLGDINYHEAFLDPLFAHKLRYPFLSFVILTVFTLLIPILLMNLLIGLA
VGDIAEVQKFAALKRIAMQVNLHTNLEKKLPYWFLSRVDQESITVYPNRPRYCGFMSVFQ
YCFGCDDAATETQSADTTLELEVLKQKYRLKDMATLLEKQHDLLKLVLQKMEIISEVEDE
DTNDLFQHKFRKEQLDHKNSKWDTVLKAVKCKDA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctccctggcgaagttgttccagtccggggaaaagaaccggtgcacttcctac
gaaggagtcgtgtgtgaatccgacgctgcttcggtggcttcgcaggatgtgtttaaggtg
atctcagatggaagtgcttgcagactacggagcttcattaagaagaatcgtgatggactt
aataaagtagacgatctcaatgccacaccgctgcatcatgctgccggacaaggtcaactt
gagtcaatgcaaatgattattgaaggttcttcagttgaagcacttaatgtgactgacagc
tctggaaacacaccgctgcactgggccacaaaaaaaaagcaggctgaaagtgttaaatta
cttcttagcagaggagctaacccaaatattcttaactccggtatgatggcaccacttcac
ttggctgtactgtctcttcaaaatgaaatagttaagattttggctgaacatagtattaca
gatgtaaacctggaaggagaaggtgggaacacacccgtattagtagcatgttacaaagat
aatgctgaagcactgaaaattctgatagaaaatggtggtaaaatatgtaaagcgaacagc
attggctgtatgccagttcatgcagcagcattttctggtgcaaaaccatgcatggaaatc
cttataaaaaagggtgaagagctgggctactgtgctgaaactcatatcaattttatcaat
catggaagatgcagtcctctccacctagcggttcaaagtggtgacttggaaatgattaag
atgtgccttgaatatggagcacaagttgatctcaagcagaatgacaaatgcacagctctt
cattttgctgctacccaaggagcaactgagattctgaaattaatgatgtcatcttataaa
ggcgaagactctatagttaatgccttagatgggaataaagaaacattgcttcacaggact
gcattgtttgatcactatgaactggcagaatatctgatatcaatgggagcaaagattgat
tgtgttgatgttgaaggtcgaactccactattacttgctacctcttgtgcgtcatggaaa
attgtgaatttattactctcaaaaggagcaaatgtggagttaaaagatcacctaggtcgt
aattttttacatctaacagtactacatcctggaggattacaacatctgaatgaaaaattt
ttgcagatgaagcatattaaagaccttgtaactgatgaagataatgagggatgtactcca
ctacattatgcatgtagacaaggggttcccctttctgtgaataacctccttggcttgaat
gtttccatctattctaaaagccgagataagaagtctccattgcattttgcagctagctat
ggacgtatcaatacctgtcaccgacttctacgagatatgggagataccaggctcttgaat
gaaggcgacaggaagggcatgactcctctacacttggctgctcaaaatggtcatgaaaaa
gttgtccagtttcttctgaaaagaggtgctctcttcctctgcgattttaaaggctggaca
gctctgcatcacgctgcctttggagggtatactcgcacgatgaggataattttggacacc
aatgtaaagtgcacagacaaagaggatgaagatgggaacacagctcttcatcttgctgcc
agtgaaggtcatgcaaaagcagttaggatgcttcttgatgatggggccaaaatactcttg
agcaaagctgatgcatcttttcttcatgaggcaatacacaatggtcggaaagatgttgtg
aatgttgttatcttacataaaagatgggaagagtctatgaaaacattttctcaccattct
tctaccaataaatgcgctatattggagatggttgaatatcttcctgaatgttttaaatta
gttttagacaattgcattattgaatcctcagaagaaaagacaagcagagatttctgtgtt
gaatataacttcagatatcttcagtgtcccttgaacttaaccaagaaattaaaggaagat
gatgacatcatctacgaaccacttattacgctaaatgctatggtacgtcataaccgtgtt
gaattgctcagtcatcctgtctgtaaagaatatttactcatgaaatggatggcttatggg
ttccgagcacatcttatgaatctaggtgtgtattctcttggcctaatacctctgaccatt
ctgatcacccacatagaaccaggaatatatttcaatggaacaaaaaatcatccaggacct
tttgacaataagaaatcctatttcataaaagtatgtatgtgtttggtttttatcatgagt
gtattgggaatctgcaaagaaataatacagctattccaacagaaacttaggtatttgttg
gattattccaatctccttgactggacaattcatagtacaagcatcatttttgtatcatct
ttatttattaatattgatcaagctgcattacagtgggagtgtggtgcaattgctatattc
ttgtcatggatgaatttcttgctgtacctgcaaagatttgaaaattacggaatctatgtt
gtgatgttttgggaaattttgagaactttgctccggattgctgttgtgttcttcttcttg
gtcttagcatttgggctcagtttccatgttcttctgggatcacagcaaccatttagcagt
ccacatctttctgtaatgcagacatttgctatgatgttaggagatatcaattaccatgaa
gctttccttgatccattgttcgcccataaattgcgttatccatttctgagttttgtaatt
ctcactgtcttcaccctgcttattccaattctacttatgaacttgctgattggtttggca
gttggggatattgcagaagtgcaaaaatttgccgcattgaaaaggattgcaatgcaggtc
aatcttcacacaaacttggagaaaaaacttccttattggtttctcagccgagttgatcaa
gaatcaatcactgtgtatcctaaccggccaagatactgtggattcatgagtgtgtttcag
tattgctttggatgtgatgatgcagcaacagaaactcaaagtgctgatacaactttagaa
ctagaagtactgaaacagaaatacagacttaaggatatggcaacactcctggagaaacag
catgacctccttaaattggtcttacaaaaaatggagattatatctgaggttgaggatgag
gatacaaatgatttattccagcacaaatttaggaaagagcaattggaccacaagaacagc
aaatgggatacagtgttaaaggctgtaaaatgtaaagatgcctag
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