Eublepharis macularius (Leopard gecko): 129333656
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Entry
129333656 CDS
T09084
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emc03016
]
129333656 (CDKAL1)
Enzymes [BR:
emc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129333656 (CDKAL1)
Transfer RNA biogenesis [BR:
emc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129333656 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
129333656
NCBI-ProteinID:
XP_054841448
UniProt:
A0AA97JNA8
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Position
7:46615502..47095737
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AA seq
577 aa
AA seq
DB search
MPAVCDSLLEDIEDIVSAQDPKPHDQHFRRRNIIPKVRKRNSQKNVEANDDPPNDSVIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLQGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIQELVDRA
EQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHVPVQTASDSILMDMKREYCVADFERVVDFLKEKVPGITIATDI
ICGFPGETDDDFQETMKLVEKYKFPSLFINQFYPRPGTPAAKMHQVPAQIKKQRTKELSS
LFHSYNPYDHKIGEKQKVLVTEESFDSKFYVAHNQFYEQVLVPKNPEFMGKMVEVDIYEA
GKHFMRGQPVPDTSVFSPSITRPLAKGEISGLTEEFRHALENGSESKTCPSAEKQKVPLS
HRVAMRLLWQQGENALKMLSLSMALLAVLIAFYYGGV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtctgtgattctcttcttgaagacattgaagacattgtgtcagcacaggac
ccaaagcctcatgatcagcatttcaggagaagaaatattattcctaaagtgcgcaaacgc
aattcacaaaagaatgtagaagccaatgatgatcccccaaatgacagtgttattcctggt
gttcaaaaaatttggatacgaacatggggctgttctcataataattcagatggagaatac
atggctggacagttggctgcttatggatacaaaattacagagaatgcttcagaagcagac
ttgtggctgctgaacagttgcactgtaaagaacccggctgaagaccactttagaaactca
attaaaaaagcacaagaaggaaaaaagaaagttgtcctagccggatgtgttccacaagct
cagcctcgccaagaatacctacaaggactgagcattattggggtccagcagattgatcgt
gtagtggaagtagttgaggagactatcaaaggtcactctgtgagattgctgggtcagaaa
aaggataatggaaaacggttggggggagcacgattggatttgcccaagattagaaagaac
ccactgatagaaattatttccatcaatacaggatgtctgaatgcatgtacctactgcaaa
accaaacatgccagaggagacctagcaagttatcctattcaagagttggtagacagagct
gaacagtcctttcaagaaggggtatgtgagatatggctgaccagtgaagacacgggagct
tatggaagagacattggcacagacctccctactctcttatggaaactggttgaagtgatc
cctgagggagcgatgctaagacttggcatgacaaacccgccctatattttggagcatctg
gaggaaatggcaaaaattctcaaccatccacgagtgtatgcttttctccatgtgcctgtt
caaactgcttctgatagtatactcatggacatgaagagggaatactgtgtggcagacttc
gaaagggtagtggatttccttaaagaaaaagtgcctggaataacaattgctacggacatc
atttgtgggtttccaggggaaacagatgatgattttcaagaaaccatgaaacttgtagaa
aagtataagtttccaagtctctttattaaccagttttacccacgccctgggactcctgct
gcaaaaatgcatcaagttccagctcaaataaaaaaacaaagaacgaaagaactatccagt
ttgtttcattcatacaacccttatgatcacaagattggggagaaacaaaaagttcttgtt
acagaagaatcatttgactccaagttttatgtcgcccacaatcagttctacgagcaggtt
cttgtgccaaaaaaccctgagttcatgggtaaaatggtggaagtggatatttatgaagca
gggaaacactttatgagaggacagccggtgccagataccagcgtgttcagcccatctatc
accagaccattagccaaaggagaaatttcaggcttaacagaggagttcagacatgcgctg
gagaacggctcagaatcaaaaacctgtccatctgctgagaagcaaaaagtaccattgagc
cacagggtggcaatgcggttgctatggcaacaaggagaaaatgcactgaagatgctgtca
ctaagcatggctcttctggcagttcttattgccttttactatggaggtgtctaa
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