Eublepharis macularius (Leopard gecko): 129333658
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Entry
129333658 CDS
T09084
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129333658 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emc03000
]
129333658 (SOX17)
Transcription factors [BR:
emc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129333658 (SOX17)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Sox17_18_mid
HTH_24
Motif
Other DBs
NCBI-GeneID:
129333658
NCBI-ProteinID:
XP_054841454
UniProt:
A0AA97JQS2
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Position
7:87258451..87260843
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AA seq
377 aa
AA seq
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MSSPDAGYASSDDQAPGPGPCSLPPLMMQCQWAESLSPLADGKGKGEAAPDPAQQGAPGR
AKGEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGQSWRALSLAEKRPFVDEA
ERLRLQHMRDHPNYKYRPRRRKQVKRLKRGDGSTADGGGGFLPPPQHPLGLPVEPGVGGG
CDGLGLPYPEQQSFAGGSFHYRDCAPLPLPALGAPFGSYNLPTPEPDSQSGACAEPAFFP
PPEDGGCLLGPYGYPTPPSAEYPCGSAPAGSTGAALFRSRFPPPLAAFPPSSPAQDPAQQ
QQPPCRRGDAAALEHIPPHDVELLADMDRAEFEQYLPFGCRPAELGLAYAAHEAPEGNPA
AAYYCAAAGGGGAYPEL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgctggatacgccagcagcgacgaccaggctccgggaccaggcccc
tgttcgctccctccgctcatgatgcagtgccagtgggcagagtcgctgagcccgctggcg
gacggcaagggcaaaggcgaggctgcgcccgatccagcgcagcagggcgccccgggccgg
gccaagggcgaagcccgcatccgccgccccatgaacgccttcatggtgtgggccaaggac
gagcgcaagcggctggcgcagcagaacccggacctgcacaacgctgagctgagcaagatg
ctgggacagtcgtggcgggcgctgtcgctggcagagaagcgccccttcgtggacgaggcg
gagcggctgcgcctacagcacatgcgcgaccaccccaactacaagtaccggccgcggcgt
aggaagcaggtgaagcgcctcaaacgcggcgacggcagcacggccgacggagggggcggc
ttcctcccgccgccgcaacacccgctaggcctgcccgtcgagcctggagtcggcggcggc
tgcgacggcctgggtctgccctaccccgagcagcagtccttcgccggcgggagcttccac
taccgggactgcgcgccgctcccgctgcctgcgctgggggcccccttcggaagctacaac
ctgcccacgccggagcccgactcgcagagcggcgcctgcgcggaacccgccttcttcccg
cccccggaggacggcggctgcctgctgggcccctacggctaccccacgccacccagcgcc
gagtacccctgcggcagcgcccccgctggcagcaccggcgccgccctctttcgcagccgc
ttcccgccgcctctggccgccttcccgccctcctcgccagctcaggatcccgcgcagcag
cagcagccgccttgcagacgcggggacgccgccgccctggagcacatccctccacacgac
gtggagctgctggccgacatggaccgagccgagttcgagcagtacctgcccttcggctgc
cggccggcggagctgggactggcctacgcggcccacgaggcgcccgagggcaaccccgcg
gccgcttactactgcgcagccgccggcggaggcggcgcctacccggagctgtga
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