Eublepharis macularius (Leopard gecko): 129334181
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Entry
129334181 CDS
T09084
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129334181 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emc03400
]
129334181 (MSH2)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129334181 (MSH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
MCU
Motif
Other DBs
NCBI-GeneID:
129334181
NCBI-ProteinID:
XP_054842065
UniProt:
A0AA97JN37
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Position
1:206684003..206772840
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AA seq
932 aa
AA seq
DB search
MAASTDASQREGSASDNGFVRAVLALPAKPDTTVRFFERGDHYAVHGEDAALAAKELFRT
REVIRMLGTGAQKLESVSLSKMNFESFLRDLLLVRQYRVEVYKNKAGSKSTKENEWCLAY
KGSPGNLAQFEDVLFGNHDMSSSVGVVGIKLVSVDGQKVVGVGFVDSLERKLEVCEFADN
DQFSNLEALLVQRGPKECVLPVGETAGDMGKLRQVVQRGGILITDRKRSEFSTKDIVQDL
NRLLKSKKKQRVSSAALPEMDKQVAISSLSAVVKYLELLTDESNFGQFELGTFDLSQYMI
LDHSAVRALNLFQSSSENAQGTQSLEGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN
LVEAFVDDAELRQSLQEDLLRRFPDFNRLAKKFQKKTATLQDCYKMYQAVNQIPNVVKAL
DKNEGKHDTLLQAVFTSPLNELFSDFSKFQEMIETTLDMDKVESHEYLVKASFDPNLTEL
REKMNKLEEKMQDALKVAARELSLEAGKSIKLESNAQYGHFFRITYREEKVLRNNLKYNV
LDTQKNGVKFSDSKLKELNEEYTKSRQEYEEAQEVIVKEIINIASGYKDPIQFLSEVIAQ
LDAVVSFAHASNAAPMPYVRPEILEMGAGKIILNGSRHPCIEVQDDVAFIPNDVTFEKGK
EMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCVSAEVSIVDSILARVGAGDSQLKG
VSTFMAEMLETSSILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFA
SHFHELTALADQVPSVNNLHVTALTTEDTLTMLYRVKKGACDQSFGIHVAELAAFPKHVI
ENAKVKAVELVEFQHIGKPQEEDEEPAAKKCYREKQEGEKIIQDFLSKVNAMPLTDISEE
HFRAKLKQLKDEVIAKNNSFVNEIISRAKVSS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttccacagacgcatctcagcgtgaggggtcggcctcagacaacggcttcgtc
cgcgcggtgttggcgttgcccgctaagcccgacacgactgtgcgtttcttcgagcgaggt
gatcactacgcggtgcatggcgaggatgcggcgctggcggccaaggagcttttccggacg
cgggaagttattcgaatgttgggaacaggagcccagaaacttgaaagtgtttcacttagc
aagatgaactttgagtcttttttgagggatctacttctagttcgtcagtacagggtagag
gtgtacaagaacaaagcaggaagtaaatccaccaaagaaaatgagtggtgcttggcatac
aagggttctccaggaaaccttgcccagtttgaggatgtccttttcggtaaccatgacatg
tcgtcttctgttggtgttgtgggtattaagctcgtctcagttgatggacaaaaagttgtt
ggagttggatttgtagattctttggaaaggaaactggaagtgtgtgagtttgctgataat
gatcagttctcaaaccttgaagctctgctggttcagaggggacccaaagaatgtgttctc
cctgttggagagactgctggagatatggggaaactgagacaggttgttcaaagaggagga
attctgatcacagacaggaaaaggagtgaattttcaacaaaagatattgtacaagatctc
aaccgcttgctcaagtcaaaaaagaaacagcgggtatccagtgcagcattaccagaaatg
gacaaacaggttgccatctcttccttgtctgcagtggtcaagtatttagaacttttaact
gatgagtctaattttggacagtttgaactgggtaccttcgatctcagtcagtacatgata
ctggatcattctgctgtcagagcgcttaatcttttccagagttcttcagaaaatgcccag
ggcactcaatctctggaagggctgttaaataagtgcaaaacccctcaaggacaaaggctt
gtgaaccagtggatcaaacagcctctgatggacaagaacagaattgaggaaagactaaac
ttggtggaggcctttgtggatgatgcggaactacgacagtctcttcaagaagacctcctc
cgtcgcttcccagacttcaatcggctggcaaaaaaatttcaaaagaaaacagccactctg
caggactgttacaaaatgtaccaggccgttaatcagattccgaacgtggtgaaggcattg
gacaaaaatgaaggaaagcatgatactctattgcaagcagtgttcacatctcctcttaat
gagttgttctctgatttctccaagttccaagagatgatcgaaacaactttagacatggat
aaggtggaaagccacgaataccttgtgaaagcttcctttgatcccaacctgacagaattg
agagagaagatgaataaactagaggaaaaaatgcaagatgcactgaaggtggcagccaga
gagctaagcttggaagctggcaagagcatcaaattggaaagtaatgcacaatacgggcat
tttttccgaattacctacagggaggaaaaagttctgcggaacaatctgaaatacaatgtc
ttggatacccagaagaatggggtaaagttctccgacagtaaattgaaagagctcaacgaa
gaatacacaaagagcagacaagaatatgaagaagctcaggaagtcattgttaaagaaatt
ataaacattgcatcaggatacaaggaccctatacagtttctcagtgaagttatagcccaa
ctggatgcagttgtcagttttgctcatgcgtcaaatgctgctcctatgccctacgtacgt
ccagagattctggaaatgggagcagggaagattatactaaatggctcaaggcacccctgt
attgaagttcaagatgatgttgccttcattccaaatgatgtgacttttgagaagggcaag
gagatgttccacatcattactggaccaaacatgggaggaaaatctacctacattcgtcag
actggagtgatagttctcatggctcaaattgggtgttttgtgccctgcgtctctgcagaa
gtgtctattgttgattctatactggctcgagtaggagctggagacagtcaactgaaagga
gtgtctaccttcatggcagaaatgctggaaacgtcatccatccttagatctgctacagaa
aactcgctgataatcattgatgaactggggagaggaacatctacatatgatggttttggg
ttggcgtgggctatttcagaatatattgccaccaaaattggagcgttctgtatgtttgca
tctcattttcatgagttgacagcccttgctgaccaggttccctctgtaaataacttgcat
gtcacagcactgaccactgaggacaccctgacaatgttgtaccgtgtgaaaaaaggggcg
tgtgaccagagttttggaatccacgtagcagagcttgctgcctttccaaaacatgtgatt
gagaacgcaaaggtaaaagctgtggaattagtggagttccagcatattggaaagccccag
gaggaggatgaagaaccagcagccaagaaatgctacagagaaaagcaggaaggtgaaaaa
ataatccaggattttctttcgaaagtgaatgcaatgccactgacagacatttctgaagaa
cacttcagagccaagctgaagcagctcaaagatgaagtcatagcaaagaacaacagcttt
gtgaatgaaatcatttcgcgagctaaagttagttcatga
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