Eublepharis macularius (Leopard gecko): 129334339
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Entry
129334339 CDS
T09084
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc02010
ABC transporters
emc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129334339 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129334339 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
emc02000
]
129334339 (ABCA1)
Transporters [BR:
emc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129334339 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
129334339
NCBI-ProteinID:
XP_054842368
UniProt:
A0AA97JSM3
LinkDB
All DBs
Position
8:129038215..129197870
Genome browser
AA seq
2258 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTLQLLIEIAWPLFVFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGIVGNFNKSIVYRLFSDAQRLLLYSQKDT
SIKDAQKLVGKLQKVGKSVSGVKLRDFLVANETFSDFLHHNTSLPRFAVDEILNSQVNLQ
RIISTGFQMRVKDLCNSTKLSEFVIISNPTVAMVSDALICLMPKEKLASAEKVFQANLDV
MKPFVRGISSNSTLQDLKEAVETLMESLGKLLKELVGMKSWSDMRQEVLFLTNVNSTSSS
TEIYQAVSRIVCGHPEGGGLQIKSLNWYEDNNYKALFSVNSTDEEAVDFYDNFTTPYCND
LMKNLESSPLSRIIWRALKPLLIGKVLYTPDTPATRAVMTEVNKTFQELGVFRDLGGMWE
EIRPKIRAFMEKSQEMDMVRTLLKNKDLWQQYLEGTSWTTEDVAMFLAKDPEDVQPVNGS
TYSWRDAFNETDRAVMTISRFMECVNLDKLEPVPNEVRLINKSMELLDQRRFWAGIVFPE
MAPGSTKLPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYIWGGFAYLQDVV
EQAIIRALTGSQKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIVKGIV
YEKEARLKETMRIMGLDNGILWLSWFISSLVPLLLSAGLLVFILKNGNLLPYSDPSVVFI
FLSVFGVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGYSLKIFAS
LLSPVAFGFGCEYFSLFEEQGVGVQWENILESPLEEDSFNLTTSLCMMLFDTLLYGIMTW
YIESVFPGQYGIPRPWYFPFLKSYWCGEESKEQQLPSLRPGSSEICVEEEPSHLRLGVSI
QSLVKVYRDGKKLAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFILG
KDIRSELSSIRQNLGVCPQHNVLFDDLTVEEHIWFYARLKGLSEKLVKRELEQMAIDVGL
PHKLKSKTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGR
TIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSSC
RNSSSTVSFLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIMKHVPEAKLVEDIGH
ELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDNGVDAETS
DGTLPARRNRRPFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGVDGKGSYQMKGW
QLIQQQFVALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPGLELQPW
MYDEQYTFISNDAPENAGTQELLNALLSEPGFGTRCMKGHSIPDTPCSAGEEGWAITPVP
ETVMEIFQKGNWTMENPSPSCVCSNDKIKKMLPMCPPGAGGLPPPQRTQNTTDILQNLTG
RNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSQEVNDAIQQVKKIL
ELGKGSSGERFLNNLGIFLKGLDTNNNVKVWFNNKGWHAVGSFLNVINNAILRANLQAGE
NPNTYGITAYNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVS
KAKHLQFISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICFQQKSYVSSSNLPVLALLL
LLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDI
LKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGAV
FFLITVLIQYRFFIKPRPVYAKLPPVHDEDEDVNRERQRIISGGGQSDILEIKELTKIYR
MKQKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFLKGNSILSNIQ
EVHQNMGYCPQFDAITELLTGREHLEFFALLRGVPEKEVCKVGEWAVRKLGLVKYAEKYA
GCYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLTSH
SMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVQDFFALA
FPGSVLKERHRSMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVNFAK
DQSDDDHTKDLSLHKNQTVVDVAVLSFLQDEKVKESYV
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atggcattctggacgcagctggggctgctgctatggaagaatttcacctataggagaagg
cagacgctccaactgctgattgaaattgcgtggcccttgtttgtgttctttatactgatc
tctgtgcggctttcttacccaccctatgaacaacatgaatgtcactttccaaataaggcc
atgccttcagctggaacgttaccctgggtccaggggattatctgtaatgccaacaacccg
tgcttccgctatccaacacctggagagtcaccaggcattgttggaaatttcaacaaatct
attgtttaccggttgttctcggatgcccagcggttgctgttgtatagccagaaagacacc
agcatcaaagatgcacaaaaactagtgggaaaactgcagaaagttggaaaatctgtctca
ggtgtgaaactccgggattttctggttgccaacgagaccttctctgacttcctccatcat
aacacttccctaccacgttttgcagtggatgaaatactgaactctcaggtcaatctccaa
cggatcatttcaaccggcttccagatgagggtaaaagacctttgcaattcgaccaaactg
tccgagtttgttatcatctcaaacccaacggtagccatggtcagcgatgccttgatttgc
ctcatgccaaaggagaaacttgcctctgcagaaaaggtgttccaggccaatctagatgtc
atgaagccatttgtaagggggatctcctccaattccactttacaggatctgaaagaagct
gtggagactttgatggagagcctcggaaagctcctgaaagagcttgttggcatgaaaagc
tggagcgacatgaggcaggaagtattgtttctgaccaatgtgaacagcacaagttcttct
actgaaatttatcaagccgtgtctcggattgtttgtggccatcctgaaggaggggggttg
caaatcaagtctctcaactggtacgaagacaacaattacaaagccctctttagcgtcaac
agcacagatgaagaagcagttgatttctatgataacttcacaacaccctactgcaatgac
ctcatgaaaaatctggaatccagtccactttcccgtatcatatggagagctctgaagccc
ttgcttatcggaaaagtcttatacacgccggacacaccggcaacgagagcggtgatgact
gaggtaaacaagacattccaggagctaggtgtcttccgtgatctcggagggatgtgggaa
gagataagaccaaagatacgagctttcatggagaaaagccaggaaatggatatggtccgg
accttactcaagaacaaggacctctggcagcaatacttggaaggtacaagctggaccact
gaagatgttgctatgttcttggcaaaagacccagaggacgttcaaccggtgaatggctcg
acctactcctggagagatgcgttcaatgagacagatcgagctgttatgactatttcccga
ttcatggaatgtgtcaatttggacaaactggaacctgtgccaaacgaggtgcggcttatc
aacaagtccatggaactgctagaccagaggagattttgggccggcatcgtcttccctgaa
atggctccgggcagcacaaaattgcctcatcatgtcaagtacaagatacggatggacata
gacaatgtggaaaggactaataaaattaaggacgggtactgggatccaggccctcgagcc
gacccctttgaagacatgcgctacatctggggaggcttcgcttacctgcaggatgtggtg
gagcaagcgatcatccgggctctcacgggctcacagaagaaaacgggcgtgtatgtgcag
cagatgccgtacccctgttacgtcgatgacatcttcctgcgcgtcatgagtcgatcgatg
cccctcttcatgacgctggcttggatttactctgtggcggtgattgtcaaagggatcgtg
tacgagaaggaggcccgcctgaaggagacgatgaggatcatgggcctcgacaacggcatc
ctgtggctcagctggttcatcagcagcctcgtccccctcctcttgagtgcggggctcctg
gtgttcatcctcaagaacgggaacctgctgccgtacagtgatcccagcgtggtgttcatc
ttcctgtctgtctttggtgtggtgaccatcttgcagtgtttcctcatcagcaccttattc
tccagggccaacctggcggccgcttgcggagggatcatctacttcactctctacttgccc
tacgttctgtgtgttgcctggcaggattacatcggctactctctcaaaatatttgcaagc
ctgctttctccggtcgcctttgggtttggctgtgagtacttttccctgtttgaagagcag
ggcgttggagtgcagtgggagaacatccttgaaagccccctagaagaagacagcttcaac
ctgaccacttctttgtgcatgatgctcttcgacactttgctatacgggatcatgacttgg
tacattgagtctgtcttcccaggccagtatggcattcccaggccctggtacttccccttt
ttgaagtcctattggtgtggcgaggaatctaaggagcagcagctaccctctctacgccca
gggtcatctgaaatctgtgtggaagaagaaccgagtcatctgaggcttggagtatccatt
caaagcctggtgaaggtttatcgcgatggcaaaaagctggctgtagatggccttacactg
aatttctacgaaggacagatcacctccttcctgggacacaatggagctgggaaaacaacc
acaatgtccatcttgactggattatttccacccacttctggcacagccttcatcctgggc
aaagacatccgctccgaactcagcagcattcggcagaatctgggggtctgccctcagcac
aacgtcttgtttgacgatttgacagtggaggagcacatctggttttatgcccgcctaaag
gggctgtcggaaaagctggtgaaaagggagctggagcagatggcgatagatgttggcttg
cctcacaaactgaaatccaagacaagtaaactctctggcggcatgcagagaaagctttct
gtcgcgctggccttcgtaggcggctctaaagtggtcatcctggatgaaccgacagcaggc
gtcgatccgtattctcgccgagggatctgggagttgcttttgaaatatcgccaaggccgc
accatcattctctcaacgcatcacatggatgaggcggacatcctcggagaccggatcgcc
atcatatctcacggcaaactgtgctgcgttggctcttcgctgtttctgaagaaccagctg
gggacaggctattatttgaccctggtcaaaaaggacgtggactcctcgctgagctcctgc
aggaacagcagcagcacggtctcgttcctgaaaaaggacgacagcgtctctcagagtagt
tctgacgctggacttggcagtgaccatgaaagtgacactttgacgatcgatgtgtctgcg
atttccaatctcatcatgaaacacgttcccgaagcaaaacttgtcgaggatatcggccat
gagttaacttacgttttgccgtatgaagctgccaaggagggtgctttcgtggagctcttc
cacgagatcgacgaccgcctctctgatttgggcatttccagttacggcatttctgaaacc
actctggaggagatatttctcaaagtggcagaggataatggtgtggatgcagagacctca
gatggcaccttacctgctaggagaaatcgacgtccctttggagacagacaaagctgcctt
cgtccgttcacggaagacgatgctttcgaccccaatgattctgacatagatccagaatct
cgagagaccgacctgctgagtggggtggacggcaaaggctcctaccagatgaaaggatgg
caactgatccagcagcagtttgtggctctgctctggaagaggctgcttattgccaagcgt
agcaggaagggcttctttgcccagattgttctccctgctgtcttcgtttgcatcgctctc
atgttcagtctaattgtacctccttttggtaaataccccggcttggaattgcaaccgtgg
atgtatgatgagcaatatacatttatcagcaacgatgctccggaaaatgctgggactcag
gagcttttgaacgctcttctcagtgaacctggtttcgggacccgctgtatgaaaggacac
tccattccagataccccttgctctgcgggagaagagggctgggccatcactcctgtgccc
gagacagtcatggaaatctttcagaagggcaactggaccatggagaatccttccccgtcc
tgcgtatgtagcaatgacaagatcaagaagatgcttcccatgtgtcctccaggggctggt
ggcctgcctcctccccagagaacacagaacacaacagacattctccagaatttgacgggt
cgcaacatctctgattacctggtgaagacctatgcacagatcattgggaaaagtttgaag
aataagatctgggtgaatgaattcaggtatggagggttttcattgggagccagtagctct
cttgtgctgcctccgagtcaagaagttaatgacgccatccaacaagtgaagaagatcttg
gaactaggcaaggggagttctggagaacgttttcttaataatctggggatcttcctgaag
ggactggacacaaacaataacgtaaaggtgtggttcaataacaagggctggcatgccgtc
ggctccttcctcaacgtcatcaacaacgccatccttcgggctaacctgcaggcaggagag
aaccccaatacctacggcatcaccgcgtacaaccacccgctgaacctcaccaaacaacag
ctgtccgaagttgccttgatgaccacgtccgtggatgttttagtctccatctgcgtcatc
tttgccatgtcctttgtcccggcgagctttgtggttttcttgattcaagagcgagtcagc
aaagccaagcacctgcagttcatcagcggggtgaagccggttatctactggctggccaac
tttgtctgggatatgtgcaactacgtggttcctgccactttggtgattatcatcttcatc
tgcttccagcagaagtcctacgtgtcttcgtccaatctaccggtgcttgctcttctcctc
ttgctctatgggtggtccataacacctctgatgtatccagcatcctttgtgttcaagatc
cccagcacagcatacgtggtactgaccagcgtgaacctcttcatcgggatcaacgggagc
gtggctacttttgtccttgaacttttcaccaacaataaactgaacaacatcaatgacatc
ctgaaatcagtattcctcatcttccctcacttctgtctgggccgtgggctgatcgacatg
gtgaaaaaccaagccatggcagatgctctggaaaggtttggtgagaatcgctttgtttcc
cccctttcctgggacctggtgggacgcaatctttttgccatggctgtggaaggtgccgtc
ttcttcctcatcacagtgcttatacagtacaggttctttatcaaacccaggccagtctat
gccaagcttccacctgtgcatgatgaagatgaggatgtaaacagagagaggcagaggatc
attagtggcggcggacaaagcgatatcttggaaatcaaggagctgactaagatatacaga
atgaaacagaaaccagctgtagacaggatctgtgtggggattccgcctggggagtgcttt
ggcctcctcggtgtgaatggagccggcaaatcctctaccttcaagatgttgacaggagac
actgatgttacaggaggggatgcttttttaaagggaaacagtatcttgtctaacatccaa
gaagttcatcagaatatgggatactgccctcagtttgatgctatcactgaactgctgaca
gggagagaacacttggaattctttgcactgttgagaggtgttcctgagaaagaagtctgc
aaggtcggcgaatgggctgttcggaaactgggccttgtgaagtatgcagaaaaatatgcc
ggctgctacagcggtgggaacaagcgaaagctttccacggcaatagccctaattgggggt
ccccccgtggtgttcctggacgaaccaaccactgggatggatcccaaagcacgccgtttc
ctttggaactgtgccttgagcatcatcaaagagggacgatctgtggtcctcacctctcac
agcatggaagagtgtgaggccctgtgtacgcggatggcaatcatggtcaacgggcgcttc
aggtgcctcggcagtgttcagcacctgaagaacagattcggtgatggctacacaatagtc
gtgcggatagcaggggcaaacccagacttgaaacctgtccaggacttctttgcgcttgcc
tttcccggcagtgtgctgaaggagaggcatcgcagcatgctgcaatatcagctcccgtcc
tctccatcttctctggcgaggatatttagcatcctctcccagaacaaaaagagactccac
atagaagactactccgtttcccagaccacacttgaccaagtatttgtaaactttgccaag
gaccaaagtgatgacgaccacacaaaggacttgtcgttgcacaaaaaccagactgttgta
gatgttgccgttctgtcctttttgcaagatgagaaggtgaaagaaagctacgtatga
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integrated database retrieval system
