Eublepharis macularius (Leopard gecko): 129334344
Help
Entry
129334344 CDS
T09084
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129334344 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emc03400
]
129334344 (APTX)
Enzymes [BR:
emc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
129334344 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
129334344 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
129334344 (APTX)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129334344 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
129334344 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FtsK_SpoIIIE_N
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
129334344
NCBI-ProteinID:
XP_054842374
UniProt:
A0AA97L4L9
LinkDB
All DBs
Position
8:141200771..141222988
Genome browser
AA seq
352 aa
AA seq
DB search
MYMCWLVSKDRSCPRIKLPHLEMVVVGRGPETEITNKKCSRRQVQLKADCNKGFVKVKQI
GVNPTSIDLVDIGKDQEVKLKPGQILHIVNRLYPYMVQFQEEMGACVGGEATRIESEKRT
KVDSENPSEDESLPGKRVKMEQEGPPGCKFGQGMNDGDSPAAVPEKSSGKRECLGHWSQG
LKASMQDPNMQVYKDERVVVIKDKYPKARYHWLVLPWQTISSLKAVTGEHLELLEHMHVT
GERMLRQCPEEDSLRFRLGYHAIPSMSHLHLHVISQEFDSPWLKNKKHWNSFTTEYFIDS
QDVIGMIKKKGRISVSSKASESLKAPLRCHVCKQPQSTMPQLKEHLRKHWPK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgtgctggctggtgagcaaagaccgaagttgtccgcgaataaaattgccacac
ttagaaatggtggtggttgggcgaggccctgagacagaaataacaaacaagaagtgttca
cgaagacaagtacaactaaaagcagactgcaacaaaggctttgtcaaggttaaacagata
ggagtcaatccaactagtattgatctggtggatattggcaaagaccaagaagttaaactt
aagccaggacaaatcctccacattgtcaaccgactgtatccttacatggtacagttccaa
gaagaaatgggagcgtgtgttggtggggaagccacgaggatagaaagtgaaaaaagaaca
aaagtagactctgaaaatcccagcgaggatgaaagcttgccaggaaaacgtgtgaaaatg
gagcaggagggcccaccaggctgcaagttcggtcaggggatgaatgatggcgacagtccc
gctgctgtgcctgaaaagtcctctggcaaaagggaatgtttgggacactggagtcaaggg
ctgaaggcttctatgcaagacccaaatatgcaggtttacaaggacgaaagggttgtcgtt
ataaaagacaagtatccaaaggctcgttatcactggttggtgctgccgtggcaaaccatc
tccagcttgaaagccgtgacaggggagcacctggaactgctggagcacatgcacgtcact
ggggaaaggatgctccggcagtgccccgaggaagactccttgcgcttcaggttgggctac
catgccattcccagcatgagccacctacatcttcacgtcatcagccaggaatttgattcc
ccttggctcaagaacaagaagcactggaattcctttacaacagagtactttatagattcc
caagatgtgattgggatgataaagaaaaaaggcagaatatctgtaagtagcaaggcgtct
gaatccctgaaggcgcctctgagatgccacgtttgtaaacagccgcaatccacgatgcct
cagttaaaggaacaccttcgaaagcattggccaaaatga
DBGET
integrated database retrieval system