KEGG   Eublepharis macularius (Leopard gecko): 129334344
Entry
129334344         CDS       T09084                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129334344 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:emc03400]
    129334344 (APTX)
Enzymes [BR:emc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     129334344 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     129334344 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     129334344 (APTX)
DNA repair and recombination proteins [BR:emc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     129334344 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     129334344 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FtsK_SpoIIIE_N zf-C2H2_2
Other DBs
NCBI-GeneID: 129334344
NCBI-ProteinID: XP_054842374
UniProt: A0AA97L4L9
LinkDB
Position
8:141200771..141222988
AA seq 352 aa
MYMCWLVSKDRSCPRIKLPHLEMVVVGRGPETEITNKKCSRRQVQLKADCNKGFVKVKQI
GVNPTSIDLVDIGKDQEVKLKPGQILHIVNRLYPYMVQFQEEMGACVGGEATRIESEKRT
KVDSENPSEDESLPGKRVKMEQEGPPGCKFGQGMNDGDSPAAVPEKSSGKRECLGHWSQG
LKASMQDPNMQVYKDERVVVIKDKYPKARYHWLVLPWQTISSLKAVTGEHLELLEHMHVT
GERMLRQCPEEDSLRFRLGYHAIPSMSHLHLHVISQEFDSPWLKNKKHWNSFTTEYFIDS
QDVIGMIKKKGRISVSSKASESLKAPLRCHVCKQPQSTMPQLKEHLRKHWPK
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgtatatgtgctggctggtgagcaaagaccgaagttgtccgcgaataaaattgccacac
ttagaaatggtggtggttgggcgaggccctgagacagaaataacaaacaagaagtgttca
cgaagacaagtacaactaaaagcagactgcaacaaaggctttgtcaaggttaaacagata
ggagtcaatccaactagtattgatctggtggatattggcaaagaccaagaagttaaactt
aagccaggacaaatcctccacattgtcaaccgactgtatccttacatggtacagttccaa
gaagaaatgggagcgtgtgttggtggggaagccacgaggatagaaagtgaaaaaagaaca
aaagtagactctgaaaatcccagcgaggatgaaagcttgccaggaaaacgtgtgaaaatg
gagcaggagggcccaccaggctgcaagttcggtcaggggatgaatgatggcgacagtccc
gctgctgtgcctgaaaagtcctctggcaaaagggaatgtttgggacactggagtcaaggg
ctgaaggcttctatgcaagacccaaatatgcaggtttacaaggacgaaagggttgtcgtt
ataaaagacaagtatccaaaggctcgttatcactggttggtgctgccgtggcaaaccatc
tccagcttgaaagccgtgacaggggagcacctggaactgctggagcacatgcacgtcact
ggggaaaggatgctccggcagtgccccgaggaagactccttgcgcttcaggttgggctac
catgccattcccagcatgagccacctacatcttcacgtcatcagccaggaatttgattcc
ccttggctcaagaacaagaagcactggaattcctttacaacagagtactttatagattcc
caagatgtgattgggatgataaagaaaaaaggcagaatatctgtaagtagcaaggcgtct
gaatccctgaaggcgcctctgagatgccacgtttgtaaacagccgcaatccacgatgcct
cagttaaaggaacaccttcgaaagcattggccaaaatga

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