Eublepharis macularius (Leopard gecko): 129334400
Help
Entry
129334400 CDS
T09084
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129334400 (CHD1)
03036 Chromosome and associated proteins [BR:
emc03036
]
129334400 (CHD1)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
129334400 (CHD1)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
129334400 (CHD1)
SLIK complex
129334400 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
129334400
NCBI-ProteinID:
XP_054842473
UniProt:
A0AA97JNY0
LinkDB
All DBs
Position
8:complement(57400279..57482112)
Genome browser
AA seq
1799 aa
AA seq
DB search
MNGHSDEESPRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSDSGS
QSESESDASKEKKVQAKPPKVDGAEFWKSNPSILAVQRSAMLRKQQQQLKAASSNSGSEE
DSSSSEDSVDDSSSEIKRKKHKDEDWQMSGSGSVSGTASDSDLEEGRNKSTCDESESDYE
PKNKVKSRKPPSRIKQKSGKKITGQKKRQLESSSSDDDDDDDDDDDYDKRGSRRQATVNI
SYKEAEEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGATTTIYAVEAD
GDPNGEFDKSKEPGEMQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALIAKKFQSCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEALE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWAPQMNAVVYLGDITSRNVIRTHEWMHLQTKRLKFNILLTTYEILLKDK
SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL
QNLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENESGPLSVGDELLSQFK
VANFSNMDEDDIELEPEQNSRNWEEIIPEVQRRRLEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQERAGGRLGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYAIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLNLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAKKE
AQRLSGAGGSKRRKMRLKKNKTVKAAKIKEEIKSDSSPSPSDKSEEDEEDSRDDVSSGKH
PNKKIKTEKENEENPDTDPGMKREIDEKRETNKRDLKREKKEKEDKKELREKDVKEKRES
KVKDYSQREKEVKEEKTNESKSDSKDKPKKTPPPDIPVHITASSEPVPISEESEELDQKT
FSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSSMNTHLIRNPDVERLK
ENTNHDDSSRDSYSSDRHLPQYHDHLKDRLHGDTYKKSDSRKRPYSAFSNGKDHRDWDHY
KQDNRYYSDGKHRKLDDHRNRDHSSNLEGSLKDSRSHSDHRIHLDHRSNSDYSHHKSSRD
YRYHSDWQMDHRASSSGPRSPLDQRSPYDSRSPLGHRSPFEHSTDHKSTPEHMWNSRKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcatagtgatgaagaaagtccaaggaatagcagtggagaatcaagccagtca
gatgatgattctggatcagcatcaggttctggatctggttcaagctccggaagcagcagc
gatggaagtagcagtcagtcaggaagcagtgattcggactctggttcagactctggcagt
caatcagaatctgagtctgatgcctctaaggaaaagaaagtccaagcaaaacctccaaag
gttgatggggctgagttttggaaatcaaacccaagtattttggctgtacaaagatctgca
atgctcagaaaacagcagcagcagttaaaagcagcatcctcaaacagcggctcagaagag
gattcctcaagtagtgaagactctgtagatgactcatccagtgagatcaagaggaagaaa
cataaagatgaagactggcaaatgtctggatcaggatctgtctctggaactgcttcagat
tccgatttggaggaaggcagaaataaaagtacttgtgatgagagtgaatctgactatgag
ccaaaaaacaaagtaaagagcaggaagcctccaagcagaataaaacaaaaaagtgggaaa
aaaatcaccgggcagaaaaaaaggcaacttgaatcatcatcatcagatgatgatgatgat
gatgatgatgatgatgattatgataaacgaggatctcgccgccaggcaacagtaaatatt
agttacaaggaagctgaagaagcaaagacagattcagatgatttgctggaagtctgtgga
gaagatgttccacaacctgaagaagatgagtttgaaacaatagaaaaattcatggacagc
cgtattggacgaaaaggagctacaggtgctacaaccaccatctatgcagttgaagctgat
ggagatccaaatggagagtttgataaatcaaaagaacctggtgaaatgcagtatttgatt
aaatggaaaggttggtcccacatccataacacttgggaaactgaagaaaccctgaagcaa
cagaatgttagaggaatgaaaaagctggacaactataagaaaaaggaccaggaaacaaaa
cgatggttaaaaaatgcttctccagaagatgtggaatattacaactgtcagcaagaactc
acagatgatttacacaaacaatatcaaatagtagagagaataattgcacattctaatcag
aagtcagcagcaggctatccagattattattgcaagtggcagggtctcccttactcagag
tgcagctgggaagatggtgctcttattgcaaaaaaatttcaatcatgcattgatgagtat
tttagcagaaatcagtcaaagaccactccttttaaagattgtaaggttttaaagcagagg
ccaagatttgttgctctaaaaaagcaaccatcttatattggaggacatgaagctttagaa
ctaagagattatcagctaaatgggctgaactggttagctcactcctggtgcaaggggaac
agttgcattcttgcagatgaaatgggcctaggcaaaacaattcagacaatctcttttctg
aattacttgtttcacgaacatcagttgtatgggcctttcttgctggtagtaccactttcc
actttgacatcttggcaaagagaaatccagacgtgggctccccagatgaatgcagttgtt
tatttaggagatattactagcagaaatgtgataagaacacatgaatggatgcatctacag
accaaacgattaaaatttaatatcttactgacaacctatgaaattttgctgaaggataag
tcattccttggtggtctgaattgggcatttataggagtagatgaggcccatcgattaaaa
aatgatgattccctcctgtacaagacactgatagacttcaaatccaatcatcgcctcctt
attactggtacacctctgcaaaactccctgaaagagctttggtccttactgcacttcatc
atgccagaaaagttttcttcttgggaggattttgaagaggaacatggtaaaggaagggaa
tttggctatgcaagtcttcataaagaacttgaaccatttctgttgaggagagttaaaaaa
gacgtagaaaaatctctgcctgccaaagttgaacagattttaagaatggaaatgagtgca
ctgcaaaagcaatattacaagtggattttaacaaggaattacaaagctctaagtaaaggt
tcaaagggcagtacctcaggctttctgaatatcatgatggaacttaaaaagtgttgtaat
cattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcctta
cagaatttaatccggagtagtgggaagcttattcttctagacaagctactgattcgctta
agggaacgtggcaacagagtgcttatattctctcagatggtgcggatgctggacatccta
gctgaatatttgaaatatcgtcagtttccctttcagagactagacgggtcaataaaaggg
gaactgaggaagcaagcactggatcattttaatgcagaaggctctgaggatttctgcttt
ttactttctactagagctggcggtcttggtataaatttggcatctgctgatactgtagtt
atatttgattctgactggaaccctcagaatgacctgcaagcacaggctagagctcatagg
attggccaaaagaaacaggttaacatttatcggctagtcactaagggatcagttgaggaa
gacatcctggaaagagccaagaagaagatggttttggatcatctagtgatacagagaatg
gacactacaggaaagactgtgctgcacacaggttctgctccttctagttctgctcctttt
aacaaagaggagctgtcagctatcttgaagtttggtgccgaggaactttttaaggaacct
gaaggtgaagaacaggagccacaggaaatggacatagatgaaattttgaagagggctgaa
accagagaaaatgaatctggcccattaagtgtgggagatgagttgctttcacagtttaag
gtggccaatttctccaatatggatgaagatgacattgaattggagcctgaacaaaactca
aggaactgggaggaaataattccagaggtccagcgacgaagattagaagaagaagaaaga
caaaaggaactggaagaaatttatatgcttccaagaatgagaaactgtgcaaaacagatc
agctttaatggaagtgaagggagacgtaggagcagaagatattctggatcagatagtgac
tctatctcagaaagaaaacgtcccaaaaaacgtggaagaccacgaactattccacgggaa
aatattaaaggatttagtgatgctgagattaggaggtttattaagagttacaagaaattt
ggaggccctcttgaaaggttagatgcaatagctagagatgctgaattagtggacaaatct
gagacagaccttagacggcttggagagctggtacataatgggtgcatcaaggcattaaag
gatagttcgtctggacaagaaagagcagggggcagacttggcaaagttaaaggcccaact
ttccgaatatctggagtgcaggtaaatgcaaaactagtcatctcacatgaagaagaacta
gcaccattgcataaatccattccttcagatccagaggaaaggaagagatatgccattcct
tgtcataccaaagcagctcattttgatatagactggggtaaagaagatgactctaatctt
ctcataggtatctatgagtatggatatggtagctgggaaatgataaaaatggatccagat
ctcaacttgacacacaagattctaccagatgatccagataaaaaaccccaggccaagcag
ttgcagactcgtgcagactacctcataaaattactcaataaggatcttgcaaagaaggaa
gcacaaagactctctggggcaggaggctcaaagaggcgaaagatgaggctcaagaagaac
aaaacagtaaaagcagcaaaaattaaagaggagataaaaagtgattcttcaccatctcct
tcagataaatctgaagaagacgaggaggatagcagagatgatgtgtcttcaggaaaacat
ccaaataaaaagataaaaacagaaaaagaaaatgaagaaaatcctgacacagatcctggc
atgaaaagagagattgatgaaaagagagagacaaacaagagggatcttaaacgggagaaa
aaagaaaaagaggacaagaaagagttaagagaaaaagacgtgaaagaaaagagggaaagc
aaagtaaaagattatagtcagagagaaaaagaagtaaaggaagaaaagacaaatgagtcc
aaatctgatagcaaagataaacccaagaaaaccccacctcctgacattcctgttcatata
acggcaagtagtgagccagttcctatatctgaagaatctgaagaactggatcagaagaca
ttcagtatatgcaaagaaagaatgaggcctgtcaaagcagcactgaaacagctggataga
ccagagaaaggtctttcagaaagagaacagttggagcataccagacagtgtctgatcaaa
attggggatcatataactgagtgtttaaaagaatacacaaatcctgaacaaatcaaacag
tggagaaaaaacttgtggatttttgtttctaaatttacagaatttgatgccagaaaactg
cacaaattgtataaacatgcaattaaaaaacgccaagaaagtcagcagcacaatgaccaa
aacatcagcagtagcatgaatactcatttgataagaaatcctgatgtggaacgactaaaa
gaaaacacaaaccatgatgatagcagcagagacagttattcctctgacagacatttaccc
cagtatcatgatcatcttaaagacagacttcatggagatacctacaaaaaaagtgactct
aggaaaaggccatactctgccttcagcaatggaaaagatcatagggattgggatcactat
aaacaagataaccgatactacagtgatggtaaacacagaaagttagatgaccacagaaac
agagatcatagctctaatctggaaggaagtttaaaagacagtcggtcacattcagatcat
cggatacacttagatcatcggtccaattcagactacagtcatcataaatcttcaagagac
tatagataccattcagactggcaaatggaccacagagcgtctagtagtggcccaagatct
ccactagatcaaagatctccttatgattcaagatctcccttaggacatagatctcctttt
gaacattcaacagatcacaaaagtacacctgaacatatgtggaatagccggaaaacatag
DBGET
integrated database retrieval system
