Eublepharis macularius (Leopard gecko): 129334410
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Entry
129334410 CDS
T09084
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04137
Mitophagy - animal
emc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129334410 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129334410 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129334410 (VCP)
03009 Ribosome biogenesis [BR:
emc03009
]
129334410 (VCP)
04131 Membrane trafficking [BR:
emc04131
]
129334410 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emc04147
]
129334410 (VCP)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129334410 (VCP)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129334410 (VCP)
Membrane trafficking [BR:
emc04131
]
SNARE
SNARE associated proteins
Others
129334410 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129334410 (VCP)
Exosome [BR:
emc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129334410 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
129334410
NCBI-ProteinID:
XP_054842490
UniProt:
A0AA97JQV2
LinkDB
All DBs
Position
8:1310653..1341392
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AA seq
806 aa
AA seq
DB search
MASGNDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIREAIESEIKRERERQTNPSAM
EVEEEDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGSGGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggggaacgattccaaagctgatgacttatcaactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagcaattaacgaagacaacagtgttgtgtca
ctgtcccaggccaaaatggatgaactgcagctgttccggggggacacagtcctgctgaaa
gggaagaagaggagagaggcagtctgtattgtcctgtctgatgacacttgttcagatgaa
aagatccgcatgaacagggttgtgcgcaacaacctgagggtgcgccttggagatgtgatc
agcatccagccttgccccgatgtcaagtatggaaaacgcattcatgtgctgcccattgat
gatacagtggaagggatcacagggaacctgtttgaggtctatctgaagccatacttcttg
gaggcatacagaccaatcagaaaaggggacatcttcctggtgcgtggagggatgcgtgcc
gtggagttcaaagtggtggagacagaccccagcccttactgcatcgtagctccagacact
gtgattcattgtgagggagaacctatcaagcgagaggatgaagaggagtccctgaatgaa
gtgggctatgatgacattggtggctgtcgcaaacagctggctcagattaaagagatggtg
gagcttcccctcaggcaccctgctctctttaaggccattggtgtgaagcctccccgtgga
atcctcctgtacggtccgccaggtacagggaagaccctgattgctcgagcagtggctaat
gagaccggagcgttcttcttcctgatcaatggtcccgagatcatgagcaagctggcaggt
gagtctgagagcaatctgcggaaggccttcgaagaagctgagaagaacgcgcccgccatc
atcttcattgatgagttggatgccattgccccaaagagagagaagacacacggtgaggta
gaacggcgtattgtgtctcagttattgacgctgatggatggcctgaaacagcgagcacat
gtgattgtaatggctgccactaacagaccgaacagcattgatccagcgctacggcgattt
ggtcgctttgacagggaggtggatattggcattcctgatgccactggtcgcctggagatc
ttgcagatccacaccaagaacatgaaactagctgatgatgtcgacctagagcaggtggcc
aatgagacccacggccatgtcggcgcagacttggctgcgctgtgctcagaggcagctctg
caggccatccggaagaagatggacctcattgacctggaggacgagaccatcgatgctgaa
gtgatgaattccctggctgtgactatggatgacttcaggtgggccctgagccagagcaac
ccctcagctttacgtgagactgtggtggaggtgccacaggtgacctggcaggacattgga
ggcttagaagacgtcaagcgagaactccaggagcttgtacagtatccagtagagcatccc
gacaaattcctcaagtttggcatgactccctccaaaggagtgctgttctatgggcctcct
ggctgcgggaagacgctgctggccaaagccattgccaacgaatgtcaggccaacttcatt
tctatcaagggtccagagctgcttaccatgtggtttggagaatcggaggccaacgtgcgt
gagattttcgacaaggcccgccaagcagctccctgcgtgctgttctttgatgagctggac
tccattgccaaggcccgtggcggcaacattggagatgggggtggagctgcagatagagtc
atcaaccagattctgacagagatggatggcatgtcgaccaagaagaacgtcttcatcatt
ggtgccaccaaccggccggatatcattgaccctgccatcttgcgacctgggcgcttggac
cagctgatttacatccccctgcctgatgagaagtcccgtgtggccatcctaaaggccaac
ctgcggaaatcacctgtggcgaaggatgtggatttggagttcctggctaaaatgaccaac
ggcttctcgggagctgatctgacagagatttgccaacgagcctgcaagctggccatccgg
gaggcaattgaaagtgagataaagcgggagcgagagaggcagaccaacccttcagccatg
gaagtggaggaggaggacccagtccctgagatccggcgtgatcactttgaggaggccatg
cgctttgcccggcgttcggtcagcgacaacgatatccgcaaatacgagatgttcgcacag
accctccagcagagccggggcttcggcagcttcagattcccatcaggaaaccagggtggt
gccggacccagccaaggcacaggtggcagcggtggtgggaatgtttacagtgaagacaac
gatgacgatctctatggttaa
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