Eublepharis macularius (Leopard gecko): 129334466
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Entry
129334466 CDS
T09084
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03020
RNA polymerase
emc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129334466 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
129334466 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129334466 (POLR2B)
03400 DNA repair and recombination proteins [BR:
emc03400
]
129334466 (POLR2B)
Enzymes [BR:
emc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129334466 (POLR2B)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129334466 (POLR2B)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129334466 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
129334466
NCBI-ProteinID:
XP_054842578
UniProt:
A0AA97JP46
LinkDB
All DBs
Position
8:complement(141902567..141934491)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHAAGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaagatgatgatgaaatcactccagac
ttatggcaggaagcatgttggatcgttattagctcctattttgatgaaaagggcctggtt
cgacagcagctggattcttttgatgagttcatacagatgtctgtgcagagaattgtcgaa
gatgctcctccgattgacctgcaagctgaagctcagcatgctgcaggagaagtggaagaa
ccgccacgttatctactgaaatttgaacaaatttatctctccaagcctacccattgggaa
agggatggtgccccttcacccatgatgccaaatgaagccaggctcagaaatctcacctat
tccgctcccctgtatgtggacataacgaagacggtcattaaggaaggggaggaccagctg
cagacccagcaccagaaaacgttcatagggaagatcccgatcatgctgcgctccacgtac
tgcctgctcaatggcttgactgaccgtgatctgtgcgagctgaacgagtgccccctggac
cctggcggctacttcattattaatgggtctgagaaggttctgattgctcaagagaagatg
gctacaaacacagtatatgtgtttgctaagaaagattccaaatatgcctacaccggagag
tgtaggtcttgcctggagaattcttctcggcccacaagtaccatatgggtgagcatgctg
gccagaggtgggcagggcgcaaagaagagtgctataggccagcgtatcgtggcgactctg
ccgtatatcaagcaggaggtgcccatcattatcgtcttccgcgcgttaggctttgtatct
gacagagacatcctggaacacattatttatgactttgaagatcctgagatgatggaaatg
gttaagccttccttggatgaagcgtttgtcattcaagagcagaatgtagcgctgaatttc
attggctcaagaggtgcgaagcctggtgtcacaaaagaaaaaagaataaagtacgccaaa
gaagttcttcagaaggagatgcttccacatgttggcgtcagcgacttctgtgaaaccaaa
aaggcttattttctagggtacatggtgcataggctgctcctggctgccttggggagaagg
gaactggatgacagagatcactacggcaacaagcgcctggacctggcagggccgctactt
gccttcctcttcagagggatgtttaagaacctgctgaaagaagtgagaatatatgcacag
aaattcattgaccgagggaaagattttaatttggaactggccattaaaacccggatcata
tcggatggtttgaagtactcgttagctacggggaactggggggaccagaagaaggctcac
caggcccgagcgggcgtgtctcaggtattgaaccgtctgacttttgcttcaacgctttcc
cacttacgtcgcctgaactctcccattggccgagacgggaaactagccaagcccagacaa
ctgcataacactttgtggggaatggtctgtcctgctgagacgccagagggtcacgccgtg
gggctcgtgaagaatcttgcgctaatggcctacatctctgttgggtctcagccatccccg
attctggaatttttggaagaatggagtatggaaaacctggaagaaatctctcctgctgct
attgcagatgccacaaagatctttgtgaatggctgctgggttgggatacacaaagaccca
gagcagctaatgaacaccctgaggaaactgcggcgtcagatggacattattgtttcagag
gtttccatgatcagggatatccgagagcgagagatccgcatctataccgacgccggccgg
atttgccgcccactcctgattgtggaaaaacaaaaactgctcttgaagaagaggcacatc
gaccagctgaaagagcgagaatataacaactacagctggcaggatctggtagccagcggt
gtagtagagtacatcgacaccctcgaagaggaaactgtgatgctggccatgacgccggac
gacttgcaggagaagggtgtggcgtactgttcgacatacacccactgtgagatccatccg
tccatgatcctaggagtctgtgcgtcaattattccgtttccagatcacaatcagtctcct
aggaatacgtaccagtccgctatgggcaaacaggctatgggagtttatattaccaacttt
cacgttcgtatggataccctggcccatgtcctgtactatcctcagaagcccctggtgacg
acacgctcgatggagtacctgaggttcagagagttgcccgcaggcatcaactccatagtg
gccatcgcttcgtatactgggtataatcaagaagactcggtcatcatgaaccgttctgca
gtcgacagaggctttttcagatctgtgttctatcgttcctataaagaacaggaatctaag
aaaggtttcgatcaggaagaagtatttgagaaaccgacacgtgaaacttgtcaggggatg
cggcatgccatctacgacaagctggatgacgacggcctgattgcccctggcgtgcgcgtg
tcaggagacgatgtcatcatcggcaagacggtaactctgcctgagaatgaagacgagctg
gagagcaccaatcgccgctacaccaagagggactgcagcactttcctgcgaacgagcgag
actgggattgtcgatcaggtcatggtcaccttgaaccaggaaggatacaagttttgtaag
atcagggtgcgctctgtgagaatcccgcaaattggagacaaatttgccagtagacacggt
cagaaaggtacctgcggtatccagtacaggcaggaggacatgcctttcacctgcgaaggt
atcacccctgatataatcatcaacccccatgccatcccttcacgcatgactatcggccac
ttgattgagtgcctgcaagggaaggtatctgcaaacaaaggagaaataggcgatgccacg
ccctttaacgatgctgtcaatgtgcagaagatttccaatttgctctcagactatggatat
cacctgagaggaaatgaggttttgtacaatggcttcaccggtcgcaaaattacatcacaa
atctttattggccctacttactaccagcggttgaaacacatggtagatgataaaatccat
tcccgagcaagaggaccaattcagatccttaacagacaacctatggaaggccgatctcgc
gatggtggcctgcgctttggcgagatggagcgggactgccagatcgcacacggagcagcc
cagttcctaagggagagattgtttgaagcctccgacccctatcaggtccatgtgtgcaac
ctgtgtgggctcatggcaatcgcaaacacaaggacacacacctacgagtgcaggggctgc
cggaataagactcagatctcgctggtgagaatgccgtatgcttgcaagctcctcttccag
gagttgatgtcaatgagtatcgcccctcggatgatgagtgcgtag
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integrated database retrieval system
