Eublepharis macularius (Leopard gecko): 129334506
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Entry
129334506 CDS
T09084
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129334506 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emc03400
]
129334506 (MSH3)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129334506 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
129334506
NCBI-ProteinID:
XP_054842632
UniProt:
A0AA97JR14
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Position
8:43947594..44035443
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AA seq
1098 aa
AA seq
DB search
MPRARRKQQPSGSSRGQLVLSKFFLPSQPAGSALAPSADPLVSAEERREGGSAAPAAAAS
ARLYTDLEPGGKRQRAAKNKDQQSKILQGRKKKERTGEQKKSTSPRICSGTFDKLQEFSS
HLEQQSHRVHSEIFHGSQFVNLKEDQHPVAGNTLYSQNIEKEETCLGFSRFSSSVISCEN
NTSDMVLNKRTKSIYTPLELQFLEVKNQYKDVILCVECGYKYRFFGEDAEVAAKELNIFC
HQDHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQMETAALKAVGEKKSSLFTRKLTALY
TKSTVIGEDVNPLLKLDYLSDAEELPSDACDNYLLCISESKESFREKRQNSIIGIVAVQP
STGEVIFDSFQDSVARLELESRILRLQPVEVLLPADVSNQTENLINTMSSVSLHDDRIRI
EKMENRHFEYSSAFQLITDFYGCQGHDSTGSQTLSVVLNLDKPVLCSLAAVITYLKEFNL
EKILHNPNNFKKLSSEAEYMALNGTTLKNLEILQNQTDRKTKGSLFWVLDHTKTSFGRRK
LKKWVTQPLLKSSEIDSRLDGVSEVLMSESSVLGQIKTLLYKMPDVERGLCSIYHKKCSV
QEFYLVVGTLSQLEAAITALIPAIRSQVRASLLQKILLEIPELLCVMKNYLNVLNEAAAK
IGDKTQLFKDLKKFPIIKKRKDEIEAVHHQIQLHLQDIRKKLNGLSVDYVTVSGQEFQVE
VKNSLISSIPPDWIKVSSTKAVSRFHTPFIVENYRHLNQLREQLVLDCNAEWLHFLDHFN
EHYHSASKAVGHLATVDCVFSLAEVAKQGDYCRPVIKDDRSEIMIKNGKHPVIDLLLGEQ
EQYVPNHTYLPKDSQRTMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEACIGIVDG
VFTRMGAIDNIFKGRSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATL
EHFIKYVGSLTLFVTHYPPVCELERVYPIQTGNYHMAFLVNEEDSEEEKATLHEETSESV
TFLYQITKEVAARSYGLNVAKLANVPDEILKKAAHKSKELERLMTMKRKRLVTFARLWNA
NDAKELQKWKSVCETEID
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggcgcggaggaaacagcagcccagtggcagttcccggggacagctggtgttg
agtaaattcttcctgccttctcagccggccggctctgccttggccccttctgctgacccc
ctcgtctccgctgaggagagacgcgagggcggcagcgcggctccagcggcggcggcttct
gctcgtctgtacacggatcttgaacctggtgggaaaaggcaaagagctgcaaaaaacaaa
gaccaacagtcaaagattttgcagggtagaaaaaagaaagagagaactggagagcaaaag
aaatctactagccctcggatatgttcaggaacatttgataaactgcaagaattctctagc
cacttagaacagcaaagtcatagggttcattcagagatttttcacggaagccaatttgtg
aatttgaaagaagaccagcatccagtggctggaaacactttgtattctcagaacatcgaa
aaggaggaaacatgccttggatttagccggttttcttcatcagttataagttgtgaaaac
aatacttctgatatggttctcaataaaagaaccaaaagtatatatacaccacttgagctc
cagttcctagaagtgaaaaatcagtataaagatgttattttatgtgttgaatgtggttat
aagtacagattctttggtgaagatgcagaggttgctgctaaggaactgaacatcttttgt
catcaagatcacaactttatgactgccagcataccaactcacagactgtttgttcatgtt
cggcgacttgtagcaaagggatataaggtaggagttgtaaaacaaatggaaacagctgcc
ttgaaggctgttggagaaaaaaaaagctctctctttacccggaaactaactgcattgtat
acaaagtctacagttataggagaagatgtgaatcctttgctgaagcttgattatctttct
gatgctgaggaactaccatctgatgcctgtgataattatctactctgtatctcagaaagc
aaagaaagtttcagagagaagagacaaaacagtattataggtatagtggctgtccagcct
agtacaggagaagttatctttgacagttttcaggattctgtagctcgtttagagttggaa
agtcggattttgcgcctgcagcctgttgaggttcttcttcctgcagatgtgtcgaatcag
actgaaaatcttatcaacactatgagttctgtaagtttacatgatgacagaattcgaata
gaaaaaatggaaaacagacattttgaatacagcagtgctttccagctgattacagatttt
tacggctgccaaggacatgatagcacaggttcccaaacactgtctgtcgtcttaaacttg
gataagccagtgttatgctccttagctgctgtgatcacttatcttaaagaatttaattta
gaaaaaatactccataaccctaataattttaagaagttatcaagtgaagctgaatacatg
gcacttaatggaactacactaaaaaatctagaaatcctacagaaccaaactgacaggaaa
acaaaaggcagcctgttttgggtcttggatcatacaaaaacttcatttggacgacggaaa
ctgaagaaatgggtgacacagcctctcttgaaatccagtgaaattgattctcgacttgat
ggggtgtctgaggttctcatgtcagaatcgagtgtccttggtcaaattaagactctccta
tataagatgccagatgttgagagaggactctgtagtatttatcacaaaaagtgttctgtc
caagagttctatctggtagttggcacgctgtctcagttggaagctgctatcacagcactt
attccagcaatacgttctcaggtgcgagcatctttgttgcagaagatactcttggaaatt
ccagaattgctctgcgtaatgaaaaattatttaaatgtacttaatgaagcagcagcaaaa
attggagacaaaactcagcttttcaaagatcttaaaaaattccctataataaagaagcgg
aaggatgaaattgaagcagtacaccatcagatccagttacaccttcaagatatacgaaaa
aagctaaatggtctttctgtggattatgtaacagtatctgggcaagagtttcaggttgaa
gtcaagaactcgctgatatcttccataccacctgattggattaaagttagtagcacaaaa
gctgttagccgtttccacactccttttattgtagaaaattacagacatctgaatcagcta
cgtgaacagctagtccttgactgcaatgctgaatggttacactttttagatcattttaat
gaacattatcactctgcctctaaagctgtgggtcacctagcaactgtggattgtgtcttt
tccttggctgaggttgctaaacaaggggactattgcagaccagtcataaaagatgacaga
tcagagataatgataaaaaatgggaaacatcctgtgattgacttgttgttaggagagcaa
gagcagtatgttccaaatcatacctacttaccgaaagacagtcaaaggacaatgatcatt
actgggcctaatatgggtggaaagagctcctatataaaacaagttgcattaataacaata
atggcacagattggttcttatgtaccagctgaggaagcatgtattggtattgtggatggt
gtattcaccagaatgggtgccatagataatatattcaaaggtcgcagtacatttatggaa
gaactaacagatacagctgaaataattagaaaagcaacttcacgttcactcgtaattttg
gatgaacttggaagaggaaccagcacgcatgatggaattgctatagcttatgctacacta
gaacattttattaaatatgtgggttcactgacactatttgtcacccattatcccccagtg
tgtgaattagaaagggtctatccgattcagactgggaactatcacatggcgtttctggta
aatgaagaggatagtgaagaagaaaaggcaactctgcatgaagaaacttctgaatctgtc
actttcctttaccaaataacaaaagaagttgctgcaagaagttatggactaaatgttgct
aaactagcaaatgttcctgatgaaattctaaaaaaggcagctcacaaatcgaaagaacta
gagagattaatgactatgaaaaggaaaaggctggtgacatttgctagactgtggaatgct
aatgatgctaaagagctgcaaaaatggaaaagtgtgtgtgaaacagaaattgattaa
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