Eublepharis macularius (Leopard gecko): 129334743
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Entry
129334743 CDS
T09084
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emc03400
]
129334743 (SMC5)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
129334743 (SMC5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_25
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129334743
NCBI-ProteinID:
XP_054842999
UniProt:
A0AA97JTV0
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All DBs
Position
8:complement(100178612..100254021)
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AA seq
1085 aa
AA seq
DB search
MATAGKRKSRATEAEESGGGSSTSRDNHRRKGSVATTAPEAGVRGERDSSFVRGSIVRIA
MENFLTYDNCEMFPGPHLNMIVGANGTGKSSIVCAICLGLTGKPSFLGRADKVGHYVKRG
CNKGKIEIELFKQPNNLIIRREISVENNQSAWFINNSPSTLRTVEDQVSALNIQVGNLCQ
FLPQDKVGEFAKLSKIELLEATEKSVGPPEMYKFHCELKNFRQREQELENSCKEKSVNLE
KLKQKNERYKQDVERYHEYKRHLDLIEMLKRKRPWVVYENVRQQYEEVKQRRDQQKEELK
VLKHARSPVVDQIRQAEEQCASLNAINKEKMAAIKETSQKCKQQQDALERKNKQIEEIKL
AFRMKKDEEMDRQKRIHNTRKMIEDWNNELRNTDNCDDIQPQINSINAELGRLMEEKAHI
DGEIANGLLEKENIHRDKKGITDRIAQFDNMMTMKEEKLRGRHKDTYTALLWLRKNKDRF
KRDVCDPMMLAINMKDQKHAKYIENHISSNDMRAFVFETQEDMSIFLREVRDKQRLKVNA
VIAPSESCAETRPFKPIEELKRYGFFSYLRELFDAPQPVMSYLCQQYRVHEVPVGTEKTR
NMIERVINETHLKQMYTAEEKYVVKVSSYTNQTLTSNTSLRAAQFLNVTVDTDERRQLEI
QLQQINRNLTLLNSQMTTLSERQKSLERRDNELRQQKKELLERKNKRKHLESKLSMKQES
LRQMEQDAINLEEESEQANIKIRTVNVQKVKLVTDLMKLIENCMILNKHRMDLVLQHTAA
VFHKNRLEDEHQAATAKLKAVEQQFMELEKKRCSLLENCKGLMRKARQACNLGPDQKIPE
DFCHAFQALPSTLDEIDALLNEEKSRASCFTGLSASVVEECNKRVEEIEQMTLELQEKKK
ELNDFRQNISQVKEKWLNPLKELVDRINNKFSSFFRSMHCAGEVDLHTENEEDYDKYGIR
IRVKFRSATQLHELTPHHQSGGERSVSTMLYLMALQEINRCPFRVVDEINQGMDPENERR
VFDVVVETACRESTSQYFFITPKLLQNLTYTEKMTVLLVYNGPSMLESNKWDLKAFQRRR
RRLQQ
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcgggcaaacgtaaatcacgggccaccgaggcagaagagagcggaggcggc
agcagcaccagccgcgacaaccaccgccgtaagggatccgtcgccactactgcgccggaa
gcgggtgttcgaggcgagagagactcgtcgttcgtgagaggttccatcgtcaggatcgcc
atggagaacttcctaacttacgataattgtgagatgtttccaggacctcatttaaatatg
atagtcggagctaatggaactggtaaatcaagcattgtttgtgccatatgcctgggactg
acagggaagccttctttcctaggacgagcagataaggttggtcactatgtgaagcgaggt
tgcaacaagggaaaaattgaaattgagctgtttaagcaaccaaacaacctcattatcagg
cgagaaatttctgtagagaacaaccagtcagcatggtttattaataacagcccttccact
ctccgaacagtagaagatcaagtctcagcattaaacatccaagtaggcaatctgtgccag
tttcttccacaggacaaagttggggaatttgcaaaattatccaagattgagctactcgaa
gctacagagaaatcagttggtcctccagaaatgtacaaatttcactgtgaactgaagaac
ttcaggcagcgggagcaagaacttgagaattcctgcaaagagaagagtgttaaccttgaa
aaactgaagcaaaagaatgaaaggtataagcaagatgtggagagataccatgaatataag
cgtcatctggatttaattgaaatgcttaaaagaaagagaccttgggtggtatatgaaaat
gttcgtcagcagtatgaagaggtgaaacaaagacgagatcaacagaaggaagaattaaaa
gtactaaaacatgcacggtctccagtagttgatcagattcgacaggctgaggagcagtgt
gcaagtctgaatgccataaataaagaaaagatggcagctatcaaagaaacatcccaaaaa
tgtaaacagcaacaagatgctttggagagaaaaaacaaacaaattgaggagattaagcta
gcttttaggatgaagaaagatgaagagatggatcgacagaagagaattcacaacactcgt
aagatgatagaagattggaataatgaactaagaaatacagataactgtgatgatattcaa
ccccaaatcaattctattaatgctgaactgggacgcttgatggaagagaaggcacatatt
gatggtgaaattgcaaatgggctccttgaaaaggagaacatacatagagacaaaaagggg
ataactgatcgcattgcacaatttgataatatgatgactatgaaagaagagaagctcaga
ggaagacacaaagacacatacactgctcttctgtggctaagaaagaacaaagaccggttt
aaaagagatgtctgcgaccccatgatgcttgcaatcaatatgaaagaccagaagcatgct
aaatatatagaaaatcacatttcatctaatgatatgagagccttcgtttttgaaacccaa
gaagatatgtctatctttctaagagaggtacgtgataaacagagactaaaagtgaatgct
gtaattgcccctagtgaatcgtgtgctgaaaccagacctttcaaaccaattgaagaactc
aaacgctatggttttttctcttacctgcgagagttatttgatgcaccccaaccagtgatg
agttacctgtgccagcaatatcgtgttcatgaggtccctgtgggaacagagaagacgaga
aatatgattgaaagggtcataaatgaaacccacctgaagcaaatgtacactgcagaagaa
aaatatgtggtgaaagtgtcttcatacacaaatcaaactcttactagtaacacgtcatta
agggcagcccagttcctgaatgtcacggtggatacagatgaaagaaggcagttggaaatt
caactccagcaaattaataggaatttgacattgctgaattctcaaatgactacgctatca
gagagacagaaatctctggaacggagagacaatgaactcagacaacagaagaaggagctt
ttggaacgaaaaaacaaaaggaagcatctggaatcaaaacttagtatgaaacaagagagt
ttaagacagatggaacaagatgccatcaacttggaagaagagtctgaacaggcgaatatt
aaaatcagaacagttaatgttcagaaagtaaaacttgtgacagacctgatgaagctcata
gagaattgtatgatcctgaacaaacatagaatggatttagttctacagcatactgcagct
gtttttcacaagaatcgacttgaggatgaacatcaagctgcgactgcaaagttaaaagct
gttgagcaacagtttatggagctggaaaaaaaaaggtgcagtctcttagagaactgtaag
ggtttaatgcgtaaagctaggcaggcttgtaaccttggcccagatcaaaaaatccctgaa
gacttttgccatgcattccaggctcttcctagcacactggatgaaattgacgctttactg
aatgaggagaaatcaagagcttcctgcttcacaggcctcagtgcttcagttgttgaagag
tgtaacaaaagggttgaagaaatagaacagatgacactggagctgcaggaaaagaaaaaa
gagttgaatgactttaggcaaaacatttcacaggttaaggaaaagtggctaaacccccta
aaagagctggttgaccgaatcaataacaagttcagtagcttttttcgttccatgcactgt
gcaggagaagtggatcttcacacagaaaatgaggaagactatgataaatacgggattcgc
attagagtcaaattccgcagtgccactcagcttcatgaactgactccacaccaccagagt
ggaggggagagaagtgtttcgactatgttgtatttgatggctttgcaggaaatcaacaga
tgcccattcagagtagtagatgaaataaatcagggaatggacccagaaaacgaaaggaga
gtctttgatgtggtggtagaaactgcttgcagagagagtacttctcagtacttctttatt
acaccaaagctcttgcagaacctcacttacacggagaagatgactgtgttgttggtctac
aatggaccttccatgctagaatcaaataaatgggacttaaaggctttccaaaggagacga
cggcgacttcagcaatga
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