Eublepharis macularius (Leopard gecko): 129334851
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Entry
129334851 CDS
T09084
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129334851 (VPS13A)
Membrane trafficking [BR:
emc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129334851 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
129334851
NCBI-ProteinID:
XP_054843177
UniProt:
A0AA97JTS3
LinkDB
All DBs
Position
8:complement(96177082..96356429)
Genome browser
AA seq
3192 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLSLGIWGGAVALKNLEIKENALYQFDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEEKQQLEAKQRELQRIED
AKQKIADQNKPQEKQDTFLEKLITQVIKNLQLKISSIHIRYEDDITNKDIPLSFGVSLQN
LSLQTSDQNWNPCIQNETAKLFYKLVRLDNFFAYWNVKSEMFYHTGYNESLNNLKHGVAG
ANVIPEGYDFVFRPISAKAKLRMNPRSDVDFSAPKLDLNVNLQDIVIELNKPQYFSIMEL
LESIDMMTRNLPYRKYRPNVPVHNNAKQWWKYVIYGILEVNIQPKLHMWSWDHIRHHRNN
MKNYKELYKIKITTKKPDEELLKKLEGIEKSLDIFNITLARQEAEVQAAKAGLRIFRPGA
KQDDEESKGWFSWMWGWTGHSGQEKVQEPKGFEQLMTPQEKDKLYAAIGYSETAIDPTLP
KSYEAMKLYVKLLSMKVSIRENTDKPELIKLALIDLCTTVTQRPGAEAIRFESSVSAFEV
QGMAQGREIPCLLSSRTVHSENNTSLFTIMFETNPLDENANQKLRVESQPLEIIYDAMTV
NSLVDFFRPPSDVRLEQLTSATLMKLEEFREKTATGLVYVIETQKVLDLKINLMASYVII
PKNGFYEPTSDKLLLDLGHLKMVSKGRSNLLDVKVKGSTLEEIMARAYDKFDIQLSSIQL
LYSKHNENWEEARNLRSSSQHILQPLDVKMELSRAMVVTDARMPKYKMFGELPLLYFNIS
DEKLKCILKLIDSIPKPESPPDTSFPPQSSQQQISSLLTTPQISTTLFPVLELHSVAGSS
ESEEEYYDAPTSPVEDLPFFEAPLGSLRRAASVKKKLQRRESIKNMTDFQLRFEISEVSL
QVCRLAGGIEKPILRLEILKLGTELKLRTYDMTATAFLSEICLICPEYLDDLNKPVYIIT
TLDNSTDDLLSLEYVKADINAPELKTAYKNVLQLIKVNFSSLDVHLHTEALLSTMNFLNN
LLPKQEASTTEIIQEKEEKKEVLKKLTSKKPKHDDVCDLHICADLSSLHIFIREQKRWIS
EICVEGLDSQMMMKKGTTEISAKLKNITIMDRDEAALYKKALYITGKEVFSFKLVSYVDA
TDGVAYTNMNAVDSRVYLTVGCIQIVFVNKFVSAVLAFVNNFQTAKEAITEATVQAAEKA
ATGVKELAQQSSRMALDVNIKAPVVIIPQSAISTDVLVADFGLITIKNEFLLVKAKGRYN
LPPVLDCIHVKLSELKLYRSSIVRNLLQNEVQLLQPLNLEVIVERNLAAIWYYDIPDIKI
FGHLKPMNLILSQEDVTTILRTLNENLGDSSSTPASLPELKDAGSSLSEAVSTSQNSGAG
IKVVTSAVVETRSSAKVKTTLKLDFQFDSLTLVLYSSNSNQCSVLDQRDNALKLAEFKLV
LISAAVKMLSDESMNASVKLTNCTLDDKRQTVQKATPRMVEMKHGSEKKVMLDITYKQGR
DGTTVIDTVVQETYLCASIEFLLTVADVFLKATAESAAAQRNLKQQSFTVKEQVPVQPAS
TMEINVVIKNPEIVFVADLTRSDAPALVVTAQCEVSMKNGPEMSKMTAAVKNITIQACPF
LPEMRKDNITTILQPCDFFFEMMQSGTDPQKADLSVKSITVKMSPIILNTVTTITSALFP
TKETEEKDISPISPDLWDQKDIKKLNMWFLEESDEHKTPVSVTELIPTGETLQMRVEAVV
ITFEAGVGHRTVPMLLAKSSFSGEVKNWSTLIHLSSRLELEVHYYNEMFGVWEPLLEPLE
VENSDEFRPWVLGMKMKKKTKKSLTESVAEEEHYKVPEYKTVINIYSEDQLNITLSKCGL
LMLSNLGTAFAEAATQTSEIFKKDKAPFVLINSLGVSVVVLPSDSFSVLNIESRTKSFHL
ENGQSLSMEYIKTKSEHDQFTAMTTLSSKVFYIWLTPENHSTTDKIPLTKVGRSLYRVRH
NDSGVVRSIVCQIDTVEGSKTITVHSPIQIKNHFSIPLNIFEDGKCLGTALPENEFNIPL
TSYRSLMFFLPATDENGISGEYEPSEGVSFDEMVKNFGKLVQKKCQPVKSANCPLIINIV
PEQDTLVSSTCTDDHWDLPYVVHLWPSVLLRNLLPYQIAYSLEGHSTTCSTLESGCSAQI
HNALLDQSKLELYLLNYLDKKWSCEYHIRTNQQEISFITFACITDVDKAELDIAIHITYA
TGQMIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKMPLLFSFQPKHFYQNNKVQLMV
TDSELSDHFSLDTVGSHGYVKCKRHKKEYHVGVTIDNSSFNLTRIVTFTPFFIITNRSTH
NLEVAEEGTDQWIPIILQQCTPFWPENNDSKLLVRVEHSNIPPKIIQLDKQENCLLLHLD
NQLGGIIVDITLSEHSTSITFSDYHDGAAPFLIINHTKGEMIEYGQSSLSMMEDALAPNK
AVLYTWAHPLGSRKLKWKCGKRNGEVTQKDDLMTPIQLGSKEIYLVSFFEGLQRIILFTE
DEKVFKVAYESEKAELAEQEIIVSLQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKK
LRWRPLSVKQTDKLEKEFNDYCSHSPTENKIVELDSNVPVCLTPTGNNMKILQPNEIPLR
RSFLPALKVQYSTSEHQSSFRVQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSEPKPF
TDVSIVMRTAGHSQISRIKYFKVLIQEMDLRLDLGFLYELADFFTFSDEVPKDQEIELFK
KDVEAVQEELKNISSTDTSQISLYEYFHISPIKLHLSFSLSTGREDSNKEEKRRELIPVQ
SINLLLKSIGTTLTDVQDVVLKLAYFELNYHFCTTQGLQWTVVMHYSKQAIKQMYVLILG
LDVLGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGFKALVGGAVGGLAGAAS
RITGAMAKGVAAITMDEDYQQKRREAMNRQPAGLKEGITRGGKGLMSGFVSGITGIVTKP
IRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTLQVIKRATNSSEDIMSLRPPRF
FSEDGVIRPYRLRDGAGSQMLQNIENGRFAKLRYFTHAMINNTDLLMITKSGILFVTKGT
FGQLTCEWQYSYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFRTPEDAKWIL
SKLEEVRESQNQ
NT seq
9579 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgttctgaaccgcttcctgggcgattatgtggtg
aatctggacagttctcagctttctctcggcatctggggaggagctgtagctcttaagaat
cttgaaataaaagaaaatgcactgtatcaatttgatgtaccatttaaagttaaagctggt
cacataggtcaactgaatttgcagattccatggcaaaacctttatactcaaccagttgaa
gctgttcttgatggagtttatttgcttatagtgcctacagccagtattaaatatgatgct
gaaaaagaagaaaaacaacagttggaggcaaagcagagggaacttcaaaggatagaagat
gcaaagcagaagattgctgatcaaaataaaccacaagagaagcaagacactttcttagaa
aagctgataactcaggtcatcaaaaatcttcagctgaaaatttccagtattcatattcga
tatgaggatgatataactaacaaagatattccattgtcatttggtgtctcacttcagaat
cttagtttacagacttcggatcaaaactggaatccgtgtatacaaaatgaaactgctaaa
ttgttctataagcttgttcgattggacaacttttttgcatactggaatgtgaagtctgaa
atgttttatcacactggttataatgaatctttgaataacttaaagcatggagttgcggga
gcaaatgtgattccagaaggctatgattttgtgttccgtccaatttcagctaaagccaag
ctccgtatgaacccacgatctgatgttgacttttctgcaccaaaactagacctaaatgta
aaccttcaggatatagtcatagagcttaataaaccacagtatttcagtattatggagctc
cttgaatcgattgatatgatgactagaaatttgccatatagaaagtatagacctaatgtc
cctgtgcacaacaatgccaagcaatggtggaagtatgttatatatggcattcttgaagta
aatattcaacccaagctccatatgtggtcttgggatcatattcgtcaccataggaacaac
atgaagaactataaagagctgtataaaataaaaataacaaccaagaaacctgacgaggag
cttttgaagaaactggagggaattgagaagtccttggatatattcaacattactctggca
agacaagaggcagaagttcaggcagctaaggctggattaagaattttcagaccaggggct
aaacaagatgatgaagagtcaaaaggctggtttagttggatgtggggatggactggacat
agtggccaagagaaagtacaagaaccaaaaggttttgaacagctcatgactccacaggag
aaggataaactctatgcagcaattggttatagtgaaacagctattgatcctacgttaccc
aaatcatatgaagctatgaagctatatgtaaagctgttaagcatgaaggtgtcaataagg
gaaaacacggacaagcctgaactgataaaacttgcattaattgatttatgtacaacggta
acacagcggcctggtgctgaagcaataagatttgaatcaagtgtaagtgcatttgaagta
cagggaatggctcaaggaagagaaataccctgtttactatcttctcgaacagtccattca
gaaaacaacacttcactgttcaccataatgtttgagacaaatcctttagatgagaatgca
aatcagaagttaagagtagaatcacagcctttggaaataatatatgatgctatgactgta
aacagcttggtggattttttccgaccccctagtgatgttcgtttagagcaactaacctca
gcaactttgatgaagttagaagaatttcgtgagaagacagcaacagggttagtgtatgtt
atagaaacacagaaggttctagatttaaaaataaaccttatggcttcctatgtcattatt
ccaaaaaatggattctatgaaccaacatctgataaattacttttggatcttggtcactta
aagatggttagtaaaggtcgatctaacttgttagatgtcaaagtcaaaggaagcactctt
gaagaaattatggcaagagcatatgataaatttgatatccagctcagcagcatacagctt
ctttatagcaaacataatgaaaactgggaggaggctcgtaatttgcgatcttcatctcaa
catatcttgcagcctctggatgtaaaaatggaactgagcagagcaatggttgtaacagat
gcaagaatgcctaaatacaaaatgtttggagagctgccattactttacttcaacatctct
gatgagaagcttaaatgtattttgaagctaattgatagcatcccgaaaccagaaagtcct
cctgacacctcttttcctccacaaagttctcagcaacagatatcttctctgctaacaaca
ccacaaatatcaactactttgtttccagttcttgaacttcattcagtagctggatcaagt
gaatcagaagaggaatactatgatgccccaacgagtcctgtggaagacttgccatttttt
gaagcacctttggggtccttgaggagggctgctagtgtgaaaaaaaagttacagaggcga
gaatccataaaaaatatgactgacttccaactaaggtttgaaatatctgaggtgtcactt
caggtgtgtcgtcttgctggaggcattgaaaagccaatccttcgtttagagattttaaaa
ttaggcacagaacttaagctaagaacgtatgacatgactgctactgcttttcttagtgag
atttgcttaatatgtccagagtacttggatgatctaaacaagccagtttacatcattaca
acattggataattcaacagatgatcttctgtcacttgaatatgtgaaggcagatattaat
gctccagaactgaaaactgcctataagaatgttctacagttgataaaggtgaatttttct
tctttagatgtgcatttacatacagaagcacttttgagtactatgaattttttaaataat
cttctgccaaaacaagaggcaagtacaacagagatcatccaggagaaagaagaaaagaag
gaagttcttaagaaattaacttcaaaaaagcccaaacatgatgatgtttgtgacctccac
atttgtgcagacttatcctcgttgcatatttttatacgagaacaaaaacgctggatatct
gaaatttgtgttgaaggtcttgatagccaaatgatgatgaagaaaggaacaactgaaata
tcagcaaaattaaagaacataactattatggatcgtgatgaggcagccctgtataaaaag
gctctctatattactggaaaagaagtcttcagtttcaaactagtgtcttatgtggatgct
acagatggtgttgcttatactaatatgaatgctgttgacagccgtgtttacttgacagtt
ggctgtattcagattgtttttgtcaacaaatttgtttctgctgttttggcttttgtgaac
aattttcaaactgcaaaggaggcaattactgaagccactgttcaggccgcagaaaaagca
gctactggtgtaaaggagctggctcaacagagttcgcgaatggcgttggatgtcaatatt
aaagcacctgttgtcataataccccagtcagcaatatcgactgatgttcttgttgctgat
tttggtttgatcactataaaaaatgaatttttacttgttaaagctaaaggtcgatacaat
cttccacctgttcttgactgtattcatgtgaaattgagtgaactaaaattatacagatca
agcattgtaagaaacttactgcaaaatgaagtacagctgctacaaccattaaatcttgaa
gtaattgttgaacgcaatttagctgcaatctggtattatgatattcccgatattaagata
tttggacatctcaaaccaatgaatctgattctaagtcaggaggatgtaaccactatctta
aggaccctgaatgaaaatttaggagacagttctagcactccagcttctctaccggagcta
aaagatgctggaagcagcctcagtgaagcagtcagtacttcgcagaattctggagctgga
ataaaagtggtgacatctgctgtagtggaaacacgctcctctgctaaagttaaaacaacg
ctaaaattggacttccaatttgattccctcactctagttttgtacagttcaaactccaac
cagtgttcagttctggatcaacgagataatgctctgaaacttgccgaatttaaattggtg
ttaatatcagctgctgtcaaaatgttgtcagatgagtcaatgaatgcttctgtcaaatta
acaaactgcactttagatgacaaacgacagacagtccagaaggctacaccaagaatggtg
gaaatgaaacatggatctgagaagaaagtcatgttggatataacttataagcaggggaga
gatggcaccacagttattgacacagttgttcaggaaacctacctctgtgccagcattgag
tttttactgactgtagcagatgtatttctgaaggcaactgctgaaagtgctgctgcccag
agaaacttaaagcaacaatctttcactgtaaaggaacaagttcctgtacaaccagcatct
acaatggaaataaatgttgttattaaaaatccggagattgtttttgttgctgatttaaca
agaagtgatgctcctgcgctggtggttacagcacagtgtgaagtctccatgaaaaatggc
cctgagatgtctaaaatgacagcagctgttaaaaatataacaatacaagcctgcccattt
cttccagaaatgaggaaagacaatattactacgatattgcagccctgtgacttcttcttt
gaaatgatgcaatcaggtactgatccacagaaagctgatctatctgttaaatccataaca
gttaagatgtctccaatcatcttaaatacagtgacaacaattacatcagcactttttcca
actaaggagactgaagaaaaagatatcagtcctatatctccagatctttgggatcagaag
gatattaaaaagttaaatatgtggtttcttgaggagtcagatgaacataaaactcctgtt
tctgtaaccgaattaattcctacaggagaaacactgcaaatgagagttgaagcagttgtt
ataacttttgaagctggtgtgggccacagaacagtgccaatgctgttagcaaagtcatca
ttttccggagaggtcaaaaactggagtactttaattcatctgtcttctcggctagaacta
gaggtgcattattacaatgagatgtttggggtgtgggaacccttgcttgaaccactggaa
gttgaaaacagtgatgaatttagaccatgggttctaggaatgaagatgaaaaagaagacc
aaaaaatctctgactgaatcagttgctgaggaagaacactacaaagtgccagagtacaag
acagtgataaatatttactcagaagatcaactgaacattacattatctaaatgtggacta
ctaatgttgagtaatcttggcacggcctttgctgaagcagctacacaaacttcagaaatc
tttaagaaagataaggcgccatttgtgttaataaattccttaggtgtctctgttgttgta
ttgcctagtgattccttcagtgttctgaatattgaatcaaggacaaaatcatttcatctt
gaaaatgggcaaagcctaagcatggaatacatcaaaactaagagtgagcatgaccagttc
acagctatgactaccctgagcagcaaagtattctacatttggcttacgcctgaaaatcac
tccaccactgacaagattccactaacaaaagtgggacgaagcctttatagagtaagacat
aatgactcaggtgttgtaagatctattgtttgtcaaattgataccgttgaagggagcaag
acaataacagtacactcacctattcagataaagaatcatttttccattcccttgaatata
tttgaagatggaaaatgtttgggaactgctttaccagagaatgaatttaatataccatta
acttcttacagatcactgatgttttttttgccagcaactgatgaaaatggaatttctgga
gaatatgaaccaagtgaaggagtgagctttgatgaaatggtgaagaattttggcaagttg
gtgcagaagaaatgtcaacctgtaaaatcagccaactgtccacttatcatcaatattgta
ccagaacaagatactttggtatcttcaacatgcacagatgatcattgggatttgccatat
gttgttcatttatggccttctgttctccttcgcaatcttcttccttatcagattgcctat
tccttagagggacacagtacaacatgcagtacccttgaaagtggatgttcagctcaaatc
cataatgcattactggatcagagcaagctggaattatatttgcttaattatcttgataaa
aaatggagctgcgagtaccacattcgaacaaatcagcaagaaattagtttcatcacattt
gcctgtattactgatgtagacaaggcagaactggatattgctattcatatcacctatgct
actggacaaatgattatagccattcacagtccatactggatggtaaacaagaccggtaga
atgctgcagtacaaagctgatggcattcatcgcaaacatccccctgactataagatgccg
cttcttttttctttccaacctaaacacttctaccagaataacaaggttcagcttatggta
acagacagtgaactttctgatcacttctcccttgatacagttggcagtcatggttacgtt
aaatgtaagcgccacaaaaaggaataccacgttggtgttactatagataacagcagtttt
aaccttaccagaatagtgactttcacacctttctttataatcacaaacagaagtacacat
aatttagaagtagctgaagaaggcactgatcaatggattcccattattttacagcagtgt
acccctttttggcctgaaaataatgacagtaaattactagttagagtagaacattcaaac
attccaccaaaaattatacagcttgataagcaagaaaattgtttgctgttgcacttggac
aaccagcttggaggcattatagtggatattacattgtctgaacattctacatcgattaca
ttcagtgattatcatgatggtgcagctccattcctgataattaatcatactaaaggagaa
atgattgaatatggacaaagttctctctctatgatggaagatgctctagcaccaaataaa
gctgtgttatacacatgggctcacccattaggctctagaaaattaaaatggaaatgtgga
aaaagaaatggggaagtaactcagaaagatgacttgatgacacctatacaattgggaagc
aaagaaatttatttagtttcgttttttgaaggcttgcagcgaattatcctattcacagaa
gatgaaaaggttttcaaagtggcatatgaaagtgaaaaggctgaattggcagaacaagaa
ataattgtatcattacaagatgttgggatttctttagtaaataactatacaaagcaggaa
gtagcttacattggaatcacaagttctgatgtagtttgggaaacaaaacccaagaaaaaa
ttaagatggaggccactgagtgtgaagcaaactgacaagctggagaaagaatttaatgac
tactgcagccactcaccaacagaaaataaaatagtcgaattggatagtaatgttccggtc
tgtttgactcctactggtaataacatgaaaatactccagccaaatgaaatccctctgaga
agaagctttttaccagctttgaaagtacaatacagtacttctgaacatcagtcatccttc
agagtccagatctataggattcagatacaaaaccagattcctggagccatatttcccttt
gtgttttatcctattaaaccccccaagtccatcaccttggattcagaacccaagccattt
actgatgtcagtattgttatgagaactgcaggacattctcagatatcacgtataaagtat
tttaaggtgctgatacaagagatggatctcagattggatcttgggtttctttatgaattg
gctgatttttttacattttctgatgaagtacccaaagaccaagagatagaacttttcaaa
aaagatgtagaagctgtacaggaagaactgaagaatatatcttcaactgatacatcacaa
atcagcttgtatgaatattttcatatttctccaatcaagttacatttaagtttttcactg
agcactggaagagaagatagcaacaaggaagagaaacgaagggagttgattccagttcag
tccataaatcttttgctaaagagtattgggacaactctcacagatgtgcaggatgttgtt
ctcaagttggcatactttgagctcaactatcacttctgtacaacacaaggactacagtgg
actgttgttatgcattattcaaaacaggcaattaaacaaatgtatgttcttattcttggc
cttgatgtcttgggcaatccatttggattcataagagatttgtctgagggagttgaagca
ttcttctatgaaccttaccagggagctatccagggaccagaagaatttgtagagggaatg
gcactgggatttaaagctctagttggcggtgctgttggcggattggctggtgctgcatca
agaataactggtgctatggctaaaggtgtagcagcaataactatggatgaagactatcag
cagaagagaagggaagccatgaataggcaacctgctggcctcaaagaaggtatcacacgt
ggaggaaaaggcttgatgtctgggtttgttagtggaataacagggattgtaacaaaacca
ataagaggagcccagaaagaaggtgcagcaggcttcttcaaaggtgttggaaaaggttta
gtgggagcagtagcaagacccactggaggaataatagatatggccagcagtacccttcag
gtaattaaaagagctacaaattcttctgaagatatcatgagtctgcgtcctccccgcttt
ttcagtgaagatggagttatccgaccatacagattaagagatggtgctggaagtcaaatg
ttacagaatattgaaaatggaagatttgcaaaactgagatacttcacacatgccatgatt
aataatacagatttgctgatgataacaaaaagtggaatattgttcgtgacaaaaggtaca
tttggacagttaacatgtgaatggcaatattcatatgatgaatttaccaaagagccattc
attgttgatggacggaggttgcgcattgaagcaaaggagcgagttaaatctgtattccat
gccaaagaatttggaaaaataattaattttagaacgccagaagatgccaagtggatcctg
tcgaagctggaagaagtaagggagagccagaatcaatga
DBGET
integrated database retrieval system
