Eublepharis macularius (Leopard gecko): 129336027
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Entry
129336027 CDS
T09084
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
emc03015
mRNA surveillance pathway
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129336027 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
129336027 (EIF4A3)
03015 mRNA surveillance pathway
129336027 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129336027 (EIF4A3)
03041 Spliceosome [BR:
emc03041
]
129336027 (EIF4A3)
03009 Ribosome biogenesis [BR:
emc03009
]
129336027 (EIF4A3)
03012 Translation factors [BR:
emc03012
]
129336027 (EIF4A3)
Enzymes [BR:
emc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129336027 (EIF4A3)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129336027 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
129336027 (EIF4A3)
Spliceosome [BR:
emc03041
]
Complex C
Other components
EJC/TREX
129336027 (EIF4A3)
Ribosome biogenesis [BR:
emc03009
]
Eukaryotic type
90S particles
Helicases
129336027 (EIF4A3)
Translation factors [BR:
emc03012
]
Eukaryotic type
Initiation factors
eIF-4
129336027 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129336027
NCBI-ProteinID:
XP_054844961
UniProt:
A0AA97JXM1
LinkDB
All DBs
Position
1:complement(206175170..206187333)
Genome browser
AA seq
410 aa
AA seq
DB search
MSGAAGGTTGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggctgcaggcggtacgacgggttcggctcggaagcggctgttaaaagaggag
gacatgaccaaggtggagttcgagacgagcgaggaggtggacgtcacccccaccttcgat
accatgggcctacgcgaggatctgctgcgcggcatctacgcctacggttttgagaagcct
tcagctatccaacaaagagcaatcaaacagatcattaaaggaagagatgtgattgcacaa
tcacagtctggaacaggcaaaacagcaacattttccatctctgttttgcagtgtctggac
atccaggttcgtgaaacccaagcgttgattttggcacctaccagggaattggcagtacaa
attcagaaggggcttcttgctcttggcgactacatgaatgtccagtgtcatgcttgtatt
gggggaaccaatgttggtgaggacatcagaaagctggattatggtcagcatgtagttgct
ggcacaccggggcgtgtatttgatatgattcggcgtagaagtttaaggactcgtgccatc
aaaatgttagttttggatgaagctgatgagatgctgaataaaggttttaaagaacagatc
tatgatgtatacagataccttcccccagcgacacaggtggttctgataagtgccactttg
ccacatgagatcttggagatgactaacaagttcatgactgaccccatccgcattttggtg
aaacgtgatgagttgacgcttgaagggatcaaacagttttttgtggctgtagagagagaa
gaatggaagtttgataccttgtgcgacctatatgacaccctcactatcacacaggctgtc
atcttttgtaataccaaaaggaaggttgattggctaactgagaagatgagagaagctaac
ttcactgtttcatcaatgcatggagacatgcctcaaaaagagagagaatctattatgaaa
gaattcagatctggggctagccgagtccttatttctacagatgtttgggctagaggcttg
gatgtacctcaggtctccttaatcattaattatgatctacccaacaacagagaattgtat
atacacaggattggtagatcaggtcgctatggtcggaaaggtgttgccatcaactttgta
aagaatgacgacattcgtattctaagagacattgaacaatactattctacccagattgat
gaaatgcccatgaatgttgctgaccttatttga
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