Eublepharis macularius (Leopard gecko): 129336471
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Entry
129336471 CDS
T09084
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129336471 (AFF1)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
129336471 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
129336471
NCBI-ProteinID:
XP_054845550
UniProt:
A0AA97JWF9
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All DBs
Position
10:18647287..18834793
Genome browser
AA seq
1224 aa
AA seq
DB search
MASTNTPSSKNSLYNEERNLRRIQEKERRNQEAHQEREPFPASVPLFGEPYKINKADELS
SRIQNMLGSYEEMKEFIATRFHQNLIGIPQNVMSLIPQHQPDRPLFPDKTSNVLPSSFQN
SSHHHKPLGPLTSNPSAGCSAHYQKVNSRIEPASDLKPRSGELSGNQKQAPEQICKTQEI
QSRRCPKKNEKCIEEDIAKELQASLLELSPLLSTLSSPVAPLSPLHSSQHVSSRSHGSSK
YKSHGPKSSPSQDLVAGTCDKESQDSLSGPVAVSSQPSSQTFPPSLPSKTSAIQQKPTAY
VRPMDGQDQAPDESPELKPLLEEYHEELYGKIADIKVNSKAKLPALKIPTEPAEQSFSNE
VHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPAKESQHAGSVIQSQKQYDAPSKTL
SLSQQGTSTLQEDLLLSDSEDGEDDQVSVSDKPSSSSTPPSAPQSQPESVALAHSSSPES
ESTSGSDSSSDSESSDSDSEANDPPTRTSTPEPSLQTSSRSWQLNNWMPHPVSPTENFLE
DDRSRCSLQDTKEQGKSFSSGSSSSSDSSKSECPQPTERHSKASGKASQSAPELHLPTKR
SYQKSPVHSGRQTVGSKQPKKSSRALVPEEQKGGLKVESEPLGPYGAKDQSSKDKPKVKT
KGRPKPGDRKEPKPTALEASEKKKHKTSHHNTVKSFPDHDAAKENVVSSTLEQLPLSPVT
QSPRVPAVGRTSSAKPATVAREDLHRDKFLLPIRDKKLLSPLRDHPVPQALVVKIELALL
ARIPQPGRKGSCPKRLEIKESHDMKKSDADRRSAEMSSNFPKKRKQGDAPRDDPKKMKLE
KENKSSSLSSHKDSSRNKVSKMSAETQRKELPLPPVSPTQLAQKPAKTAQKRPKSESGAS
SQPPRHGESIPKNKESHKDSSSSKHRKMEGKPSETSKSSKGSVEDASNPFPVPSLPNGTS
KPTKPQSKPHKQHPVEYHLKEAKRLKHKADATTDKVGKAIKYLAAALSFIECGIAMESDT
LTPKPAYTMFAETIDLIKFIMTLKSFADSSTTTHEKIFAVLCMRCQAILYMAMFRYKKDT
AIKYSRTLNEHFKSSSRITQAPSPCVARSTGTPSPLSPMPSPASSVSSQTGSSTSSCGGG
SGGSSISVPHHIPPITSSFVNITSYILYAYDLWEQADVLARKNKKFFSELSAAVCTLSLN
SSMTELVPYTRQGLQWLKLEPNTP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacaaacactccaagtagcaaaaacagcttatataatgaagaaagaaatctg
cgccgcatccaagaaaaagagaggagaaatcaggaagctcatcaggagagagagccattt
ccagccagtgttcccctatttggagaaccatataagattaacaaagcagatgagttgtcc
agccgaattcagaacatgttgggtagttacgaagagatgaaggagttcatcgccaccagg
tttcaccagaatctcatagggatccctcaaaatgtcatgtctctgatccctcaacaccag
ccggatcgcccactcttccctgacaagaccagcaatgtgctaccctcctcattccagaac
agcagccatcaccacaagcccttgggaccccttacttcaaatccttctgcaggttgctct
gctcactaccaaaaagttaactcaaggatagaaccggcctctgatttgaaaccacggagc
ggtgagttgtccggcaaccagaagcaagctccagagcagatctgcaaaactcaagaaatc
caaagtaggaggtgtccgaagaagaacgaaaaatgcattgaagaggacattgccaaagag
ctgcaggcctccctgctggaactttccccattgctgtccactttgtcttccccagtagca
cccctgtctcctctacattccagccagcatgtcagttccaggtctcacggcagcagcaaa
tacaaaagccatgggccgaagagttccccttctcaggacctagtggctggaacctgtgac
aaggaaagccaggacagcttgagcggccccgtagctgtctcttcccagccttcctcccag
acatttcccccatccttaccatcaaaaacgagtgcaatacagcaaaaaccaactgcctac
gtcagaccaatggacggtcaagatcaggcaccggacgaatccccagagctcaagccactt
cttgaagaataccatgaagaattgtatgggaaaatagcagatataaaggtgaactccaaa
gccaagttgcccgcgttgaaaatacctactgaaccagctgagcaatccttctccaatgaa
gtccattgtgttgaagaaattttaaaggaaatgacccattcatggccgcctcctttgaca
gctatccatactcctagcactgctgagccttctaagtttccttttcctgcaaaggaatcc
cagcatgctggatcagtaattcagagccagaaacagtatgatgcaccttctaaaactttg
tctctttctcagcaaggaacgtcaacactgcaggaagaccttttgctcagtgatagcgaa
gacggcgaagatgaccaagtcagtgtttctgataagccatcttcctcatccactcctcca
agtgccccacaatcgcagccggagagtgtggcattggcacattccagcagcccggagtct
gagagcacaagcggctcagacagttcctcggactccgagagcagcgatagcgacagtgaa
gcaaatgatccccccacaagaacctccacacctgagcccagtctacagacatccagtaga
tcatggcagctgaacaattggatgcctcacccagtgtctcccactgagaatttccttgag
gatgaccgcagtaggtgcagtctccaggacactaaagagcaaggcaagtcattcagcagc
ggtagcagtagcagcagcgacagcagcaaaagcgaatgtccccagccaacggagcgtcac
tccaaagcctctggcaaagcttcccaatctgccccggaactgcatctccctaccaagcgg
agctaccagaagtctcccgtgcactcaggcagacagactgtgggcagcaagcaacccaag
aagtccagcagagccttagtaccggaggagcagaagggaggcttgaaagtggagagcgag
ccacttggtccatatggggctaaagaccagtcttccaaagacaagcccaaagtaaaaacg
aaagggaggcccaagcctggtgacaggaaggagcccaaaccaacagcgctggaggcttcg
gagaagaagaagcacaagacctcacaccacaacactgttaaatcatttccagaccacgat
gctgcaaaagagaatgtggtcagcagcaccctggaacagttgcccctcagccccgtaact
caaagcccccgggttcctgctgttggtagaaccagcagtgcaaagccggccactgtagcg
agagaggacctccatagggacaagtttctcttgccaatcagggataagaagttgctgtcg
cccttgagggatcacccggtacctcaagctcttgtggttaaaattgagcttgccctcctc
gcacgtattccacagccaggcaggaaggggagctgccccaaacgtcttgagatcaaagag
agccatgatatgaagaagtcggatgcagacaggaggagtgcagaaatgtcaagcaatttc
cccaaaaagaggaagcaaggagatgcacccagagacgatccgaagaagatgaagctggag
aaagaaaacaaatcgtcttcgttgtcaagtcataaagactctagtaggaacaaggtttcc
aagatgtcagcagagacgcaaaggaaagagctgccgctaccaccagtgtctcccacgcag
cttgcccagaagccagccaagacggcccagaaaaggccaaagagtgaaagcggtgcctcc
agccagcctcctagacatggcgagagcatccccaagaacaaggaaagccacaaagattca
tcgtcctccaagcacaggaaaatggaaggaaagccttccgaaacctcaaagagcagcaaa
ggatccgtagaggatgcctctaaccctttcccagtgccttctttgccaaacggtacctcc
aagccaacgaaacctcaaagcaagccgcacaaacaacatccagtggaatatcacttaaag
gaggccaagaggctgaagcataaagcagatgcgacgacagacaaagtcgggaaggccatc
aaatacttggctgctgccctgtcgttcattgagtgtggcattgcgatggaatcggacacc
ctgacaccaaagccagcatataccatgtttgcagagaccatagacctcataaaattcata
atgacattaaaatccttcgcggactcttcaacaacaacacatgaaaaaatatttgctgtt
ttatgcatgcgctgccaagccattttgtacatggcaatgttccgctacaaaaaggacact
gcaataaagtattcccggacccttaatgaacacttcaagagttcctctagaatcacacaa
gcaccttctccatgtgttgcaaggagcacaggaacaccgtctcctctttctccaatgccc
tctccagccagctctgtgagctcccagacgggctccagcaccagtagctgcggcggaggc
agcgggggctcttccatcagcgtccctcatcacatcccacccatcacctcttccttcgtc
aacatcacttcctatattctctatgcctatgatctctgggaacaagctgatgttttggcc
aggaagaataaaaagtttttttccgagctcagtgctgccgtgtgcacgctctccttgaac
agcagtatgacggaactggtaccctacacccgtcagggtttacagtggctgaaactggaa
ccaaatacaccttag
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integrated database retrieval system
