Eublepharis macularius (Leopard gecko): 129336623
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Entry
129336623 CDS
T09084
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129336623 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129336623 (SMARCA5)
03036 Chromosome and associated proteins [BR:
emc03036
]
129336623 (SMARCA5)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
129336623 (SMARCA5)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
129336623 (SMARCA5)
RSF complex
129336623 (SMARCA5)
WICH complex
129336623 (SMARCA5)
B-WICH complex
129336623 (SMARCA5)
NORC complex
129336623 (SMARCA5)
BRF complex
129336623 (SMARCA5)
NuRF complex (fruit fly)
129336623 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
129336623
NCBI-ProteinID:
XP_054845834
UniProt:
A0AA97JZ57
LinkDB
All DBs
Position
10:52745758..52773805
Genome browser
AA seq
1038 aa
AA seq
DB search
MSTAGQETENGSALLAAGPVAGAETAEIAPVAAEGALGGGGDAGEEMIDELSGKQKENQE
PDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNL
LSVGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLY
ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTL
RAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKN
EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCL
GDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDIL
NSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKL
KEQESRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVF
MLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEE
RIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDID
GILERGAKKTAEMNEKLSKMGESSLRNFTVDTESSVYNFEGEDYREKQKMAFTEWIEPPK
RERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKT
IGYKIPRNPDLPNAAQAQKEEQLKIDEAEPLNEEELDEKEKLLTQGFTNWNKRDFNQFIK
ANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRI
SIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQ
CIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLAQK
RKLDGTPDGRGRKKKLKL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggccgggcaggagacggagaatgggagcgccctccttgccgcgggtccagtc
gccggcgcggagaccgcggagattgccccggttgccgccgagggggcgcttggaggcgga
ggagacgccggcgaggaaatgatcgatgaattatcgggaaaacaaaaagaaaaccaggaa
ccagatcctacatatgaagaaaaaatgcaaacagatcgagcaaacagatttgagtatctg
ttgaagcaaacagaattgtttgctcattttattcagcctgctgcacaaaagactccaact
tcacccttgaaaatgaaaccaggacggccacgaataaaaaaggatgaaaaacaaaatctg
ctgtctgttggagactatcgacatcggagaactgaacaagaggaagatgaggagctgttg
acagaaagttcaaaaacaactaatgtttgcacccgatttgaagaatctccatcttatgta
aaatgggggaaactgcgtgattatcaggtccgagggttaaactggcttatttctttgtat
gaaaatggcatcaatggcatcttagcagatgaaatgggtctgggaaagacactgcaaaca
atttctcttcttgggtacatgaaacactacagaaacattcctggtcctcacatggtattg
gttcctaaatcaactttgcataattggatgaatgaattcaagagatgggtgccgactctt
cgggcagtatgtttgataggtgataaagaccagcgagctgcctttgtgcgagatgttttg
ctgccaggtgaatgggatgtctgtgtaacatcttatgaaatgctcattaaagagaaatct
gtgttcaaaaaatttaactggagatacctagttattgatgaggctcaccggatcaaaaat
gaaaaatcaaagttgtcagaaattgtaagggaattcaagactactaataggttgctgtta
actggaacaccactgcagaacaacttgcatgaactctgggcacttcttaacttcctgttg
ccagatgtctttaattcagctgaggactttgattcatggttcgatacaaacaattgtctt
ggggaccaaaagctagtggaaagactccatatggtgcttcggccatttctcttacggcgt
attaaggctgatgtagagaagagtttacctccaaaaaaggaagttaaaatatatgttggg
ctcagcaaaatgcagagagaatggtacacaaggatattaatgaaggatatagatatattg
aactctgctggaaaactggacaaaatgagactgctaaacattctaatgcaattacgcaaa
tgttgcaatcatccctacctttttgatggagcagagcctggcccaccttacacaacagat
atgcatttggttactaacagtgggaaaatggtagttttggacaaactgttaccaaaacta
aaagaacaagaatcacgcgtactcatcttcagtcagatgaccagagtcttagatatctta
gaagattactgcatgtggcgaaactatgaatattgtcggcttgatgggcagacacctcat
gatgaaagacaagcatctattaatgcatacaatgagcctggcagctcaaaatttgtgttc
atgctgagcacgcgtgctggcggtctaggaatcaatctggctacagctgatgtcgtaatt
ctgtatgattcagactggaatccacaagtagaccttcaggctatggatcgggcacatagg
attggtcaaacaaagactgttagagtattcagattcattacagacaatacagtagaagaa
agaatagtagaacgagcagaaatgaagctccgtttggattccatagttattcaacaagga
agattagtggatcaaaatctgaacaaattagggaaagatgaaatgttacagatgattaga
catggagctacccatgtctttgcttcaaaggagagtgaaattacggatgaagatattgat
ggtattttggaaagaggtgcaaagaagactgcagagatgaatgaaaaactctccaaaatg
ggtgaaagctcactcagaaactttacagtggatacagagtccagcgtatataactttgaa
ggggaagattatagagagaaacaaaagatggcattcacagaatggattgagccaccaaaa
cgtgagagaaaagcaaattatgcggttgatgcttatttcagggaagctcttcgtgtcagt
gaaccaaaagcaccaaaggcaccacgacctccaaaacagcccaatgttcaggatttccag
ttctttccaccacgcttgtttgaactattggaaaaagaaattctttattacaggaaaact
attggatacaagatacctcgtaatcctgacttgccaaacgcagcccaggcacaaaaggaa
gaacagctgaaaattgatgaagctgagccccttaatgaagaggagttagatgagaaagag
aagctattaacccaggggtttaccaactggaataaaagagacttcaatcagttcatcaag
gctaatgaaaaatggggccgtgatgatattgaaaacatagctcgggaagtggaaggaaag
actccagaagaagtcattgagtattctgctgtgttctgggagagatgtaacgaactccaa
gatattgagaagatcatggctcagattgaaagaggtgaagctcgaattcagaggaggatt
agcattaaaaaagcacttgacacaaagattggcagatacaaagctcctttccaccagctg
agaatatcatatggcactaacaaaggaaagaattatacagaagaggaggatcgctttttg
atttgtatgcttcacaaactgggatttgataaagaaaatgtttatgatgagttgagacaa
tgtattcgtaactctccccaattcagatttgactggttcctcaagtccaggactgcaatg
gagctgcagagaagatgcaatactttaatcactttgattgaaagagagaacatggaactg
gaagaaaaggagaaagcagaaaagaagaagcgtggaccaaagccatcattggctcagaaa
cgtaaactggatggtactcctgacggaagaggacgaaaaaagaaattaaagctgtga
DBGET
integrated database retrieval system
