Eublepharis macularius (Leopard gecko): 129336653
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Entry
129336653 CDS
T09084
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04120
Ubiquitin mediated proteolysis
emc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129336653 (SYVN1)
04120 Ubiquitin mediated proteolysis
129336653 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emc04121
]
129336653 (SYVN1)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129336653 (SYVN1)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129336653 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
129336653
NCBI-ProteinID:
XP_054845893
UniProt:
A0AA97L7L6
LinkDB
All DBs
Position
1:225975725..226003437
Genome browser
AA seq
623 aa
AA seq
DB search
MFRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEAGQQPPAHQT
PLIPQPPNFPQGILPPFPPGMFPLWPPMGPFPPVPGAQPPNNADNASAAPSTSGTQPTAG
TSRPSGGSASGSDSTAPPGTVPGFPFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEELR
AMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRSAQPPSTPATSASPQ
DTVSSEPSTAEPTTFQPADSTTSAAVDPDSSGQAAPSLVAGAEGFTDLSGPDPDDEHSPL
EEPDTAELRRRRLQKLELSSSAH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatggctgccagcctggccttgacctctgcggtggtggct
catgcctattacctgaagcaccagttctacccgactgtggtgtacctgactaagtccagc
cccagcatggcggttctgtacattcaggctttcgtcctggtgttcctgttaggcaagttc
atgggcaaagtattttttggacagctgcgagcagcggaaatggagcatctgcttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggacgacttcagc
ccccgttttgtggcccttttcacactcctcctcttcctcaagtgcttccactggctggct
gaagaccgggtggattttatggagaggagtccaaacatttcctggctcttccatttccgc
attgtctctctgatgttgctgttgggcatcctggatttcttgtttgtcagtcatgcctac
cacagtatactcacacggggagcctctgttcagctggtctttggctttgagtatgctatc
ctcatgacaatggtgctcaccatctttatcaaatacatcctgcactccatcgaccttcag
agtgagaatccctgggacaacaaggcagtgtacatgctttacacagaactcttcacaggt
ttcatcaaggtgctgctgtacatggccttcatgaccatcatgatcaaagtacacaccttc
ccactttttgccatccggcctatgtacctggctatgaggcagtttaaaaaggctgtgaca
gatgccatcatgtctcgccgggccatccgcaacatgaacaccctgtaccctgatgccacc
ccagaagagctgcaggctatggacaatgtgtgtattatctgtcgggaggagatggtgaca
ggtgcgaagcgcctgccttgcaaccacatattccacaccagctgcctgcggtcatggttc
cagcgccagcagacctgccccacatgccggatggatgtcctccgtgcctctctccctact
cagtcccaaactcctcctgagcagcaggaggcagggcagcagccgccagcacaccaaaca
ccactgattcctcagccacccaattttccccaaggcatcctgcctccctttcctccgggg
atgttccctctgtggcctcccatgggcccatttcctccagtgccgggtgcccagccaccc
aacaatgcagacaatgcttcagctgctccttccacatcaggaactcagccaacagcaggc
acttcacggcccagtggaggttcagcctctggatcagactcgactgccccaccaggaacg
gtacctggtttcccattccctccaccttggatggggatgcctttcccacctctctttggt
ttccctcccatgccagttccaccctcagggtttgcagggctgactgaggaagagctgcga
gccatggaaggccacgaacggcagcacttggaagcccggctccagtgtctgcagaacatt
cacacgctcctcgatgcagccatgttgcagatcaaccagtatctcactgtcctggccact
attgggacgccccgctctgcacagccaccaagcactccagccacgtcagcatcacctcaa
gacactgtcagttcagagcccagcactgcggaacccaccactttccagcctgctgacagc
actacttcagcagcagtggacccagattcctcaggccaagccgctccatccctggtagca
ggtgctgagggtttcacagacctttctggtcctgatccggatgacgagcactctcctctg
gaggagcctgacacggcagagctgcgcaggcgccgccttcagaaactggaactgtcctcc
tctgcccattga
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