Eublepharis macularius (Leopard gecko): 129337121
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Entry
129337121 CDS
T09084
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129337121 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129337121 (NUP54)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129337121 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
GTP-bdg_N
Motif
Other DBs
NCBI-GeneID:
129337121
NCBI-ProteinID:
XP_054846606
UniProt:
A0AA97K086
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All DBs
Position
10:complement(11793127..11807902)
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AA seq
503 aa
AA seq
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MAFNFGAAAGAAAAPNPAGAFGGFGTATTTAGPTFSFSTPANTSTPGLFGATQNKGFGFG
GGFGTAAGTGTGLGTGLGTGLGFGGFSTQQQQQQTLGGLFSQPAQAPAQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFSSSSAPVEFTQENPFCRFKAVGYSCMPNN
KDEDGLVALVFNKKEAEIRSQQQQLVESLHKLLGSNQTLTVNVEGVKTMPDDQTEVVIYV
VERSPNGTSRRVPATTLYAHFEQANIKTQFQQLGVTLIMARTELSPAQIKQLLQNPPAGV
DPIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAP
TQFKGRLNELMSQIRMQNHFGAVRSEERYYVDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLIEHGLNESIPIRGGVFS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggcagctgccggcgctgcagccgccccgaaccctgctggagcc
tttggagggtttggaacggcaaccaccacagccggacctacgtttagtttctccactcct
gcaaacacaagtacccctgggctattcggtgccactcagaacaaaggctttggatttggc
ggcggcttcgggacagcagcaggcaccggtaccggtctcgggactgggttgggaactggg
ttgggattcggaggcttcagcacccagcagcagcagcagcaaacactaggcggcctcttc
agtcagcctgctcaagcccctgcccagtctaaccagctgataaacacagcgagtgccctg
tctgcacctacactcctgggagatgagcgggatgctattttggccaagtggaaccagctg
caggcgttttggggcacaggcaaaggatacttcagcagcagcagtgcccccgtggagttc
acccaggaaaacccgttctgcagatttaaggctgtgggctacagctgcatgcccaacaac
aaggacgaagatggtttggtagccttggtctttaataaaaaggaagcagagatccgaagc
cagcagcagcagcttgtggaatcgttgcacaaactcctgggctccaaccagactcttact
gtcaacgttgaaggtgtaaagacaatgcccgatgaccagactgaggtcgtcatctatgtg
gttgagcggtcaccaaatgggacctcgaggcgagtcccggccaccaccctgtatgcacac
tttgaacaagcaaacatcaagacccagttccagcagctgggtgttaccctcatcatggcc
agaacagaactctccccggcccaaatcaagcagctgctgcagaatcctcctgcaggtgtt
gatcctatcatttgggaacaggccaaagtggataacccagatcctgaaaagttgattcca
gtgccgatggttggcttcagagaactgttgagaaggttgaaggtccaagaccagatgaca
aaacaacatcaaaccagattagatataatatcagaagacatcagtgagctgcagaaaaac
cagacgacaacgatggccaaaatagcccaatacaagaggaagctgatggacctttcacac
agaacgttgcaggtattaatcaagcaagagatccaaaggaaaagcggctatgccatccaa
gcagacgaggagcagctccgcgtgcagttggatacaattcagtgtgaactcaacgcacct
acgcagttcaagggtcgactgaacgagcttatgtcccagatcagaatgcagaaccacttt
ggagcggtgagatccgaagagaggtactacgttgatgcagacctcttgcgggaaatcaaa
caacatttgaagcagcaacaagaaggtctgagtcacctgatcagcatcataaaagatgac
ctggaagatataaagctgatagaacatggattaaatgaaagcatccctatcagaggaggg
gtcttcagttga
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