Eublepharis macularius (Leopard gecko): 129337510
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Entry
129337510 CDS
T09084
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
emc03037
]
129337510 (NPHP3)
Cilium and associated proteins [BR:
emc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
129337510 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
NPHP3_N
TPR_17
TPR_14
TPR_11
AAA_16
TPR_3
AAA_22
NACHT
KAP_NTPase
ARM_TT21_4th
DUF2225
AAA_14
AAA_19
Birna_VP3
T2SSE
Motif
Other DBs
NCBI-GeneID:
129337510
NCBI-ProteinID:
XP_054847233
UniProt:
A0AA97L9E8
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All DBs
Position
11:34436325..34482923
Genome browser
AA seq
1317 aa
AA seq
DB search
MGTASSLVSPVGTVGEVIEDTYEGVGGEACEIPVEVKPKARLLRSSFRRVGTSRPGGLIG
ASFKSTASVQELECMAEYERLKKEYEIFRISKNNELASMMKKEAKLDKENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
EAKLQRLQAQGIHIFDPEETDSDDSCSEVAATGAQSEYWSGGALGSEPSMGSMMQLQQSF
RGPEFAQSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSNTVRVYLINTEETKSE
VDIFIQKYSPKLQKYCETMEYFFQAVHFRVETESPIQSVRKWEIEKSSLTILFLHLTLPS
CLLEECEEVFLKNPEGKPHLLYYRLEEGQNSSDSVQQLVEQVRYMNKAKIISHVGGVEEG
AHAVYSYVEKTIKKDILGCEMAELEKKDAADNSDSSVPEEEIFGDVLWDAHDEQEQMEAF
QQASNSTCELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSSNT
LILYHFVGKPTSSSAEPALILKRLTLKLMQHSWSVSPLTVDPAKLLEEFPRWLEKLSAHH
QGSIIIIIDSVDRIQQAEKHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSI
KDVNSLINKECSSASLKLTKEQEKKLEKHCHSSTTCNALYVTLLSRMVAGAGSAENIDLI
LQKCLLCQDTVSLYKLVLKSIHESLKSEKDQGLLKEILCLISISHNGVSESELIELCPEL
SWAVLASVVHSLYKMCFLTYGCGLLKFRHLQAWETVKLEFMEEDHNAFDACRKKLIDYFT
KQLSQERVTWRSADELPWLFQQQGDKQKLQKCLLNLFVSQNLYKRGHFAELLSYWQLLGK
DKNSMAAEYFSSLKLYEKSCEREENMISLADLYETLGRFLKDLGLLSQAIAPLQRSLEIR
ETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGTEHLRVARELDAL
ATLYQKQNKYEQAEHLRKKSFKIQQKAVRRKGSLYGFALLRQRALQLEELTLGKDTSDNA
RTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGSDHPDCAQSLNNLAALYNEKKQYDK
AEELYEKALSIRKRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGP
KHPSVATALVNLAVLYCQMKKHLEALPLYERALKIYEDSFGRMHPRVGETLKNLAVLSYE
GGDFEKAAELYKRAMEIKEAETLLTGGKVASRHSSSGDTLSVKSAFSPHVFLQQGQS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcctcatccttggtaagcccagtaggcacagttggggaagtgattgaagac
acatatgagggggttgggggtgaagcctgtgaaatccccgtggaggtgaaaccaaaagcc
cgcctcctgcgcagctccttccgccgcgtggggacgtcacggcctggaggtcttattggt
gctagcttcaaatccactgcctctgttcaagagctggagtgtatggcagagtacgaacgc
ctaaagaaagaatatgaaatctttcgtatcagcaagaacaatgagctggcatctatgatg
aaaaaagaggcaaaactggataaggaaaacaagcgcctgcgggcagagctgcaggcactt
cagaaaacatatcagaaaatactcagagagaaagaaagtgctttggaagctaaataccaa
gccatggagagagctgctacatttgaacatgaccgagacaaagtcaagagacagttcaag
attttcagagaaaccaaggaaaatgaaattcaggatttactgagggccaagcgagagttg
gaggcaaaactgcagagactgcaagctcaaggcatccacatatttgaccctgaagagaca
gactcggatgatagctgttcagaggttgctgcaactggagctcagtcggagtattggagt
ggtggagccttgggaagtgagccatccatgggcagtatgatgcagcttcaacagtctttc
agaggccctgagtttgcacagagttccattgatgtggaagggccatttgcaaatatcaac
agagatgattgggatgcagctgttgccagtctgttgcaggtcactccattgttttcccac
tctttgtggagtaacacagtaagagtatatctcattaatacagaagagactaagtcagaa
gtagacatcttcatacagaaatactctccaaaacttcagaaatattgcgagacaatggag
tacttcttccaagctgtccattttcgagtagaaactgaaagtcctatccagtctgtgagg
aaatgggaaattgagaaaagttctttaactattttgtttttgcatttaactttgccaagc
tgtctgctggaggagtgcgaagaagtctttttgaaaaacccagagggaaagccccatctt
ctttactaccgtttggaagagggccaaaacagctcagattctgtgcagcagttagttgaa
caagttcgttacatgaacaaagcaaagataatcagccatgtgggaggagtagaggaggga
gcacatgcagtctacagttacgtagaaaagaccataaagaaggatatccttggctgtgaa
atggcagagctggaaaaaaaagatgcagctgacaacagtgactcctctgttcctgaagag
gaaatctttggagatgtgctgtgggatgcacacgatgaacaagaacagatggaggctttc
cagcaggcctccaattcaacttgcgagctaggatttgaaaagtattacgaacgcttaaac
gacttagtggcagcaccagcacctattccaccccttcttgtatctggagggccaggctct
ggaaaatctcttctgctatcaaaatggattcagctgcaacagaagcattcatcaaataca
ctaattttatatcattttgttgggaaacctacatcaagcagtgcagagcctgccctgatc
ctcaaacgtctcacattaaagctcatgcagcattcctggtcagtctcaccgctgacagtg
gatccggctaaactgttagaagaatttcctcgttggctggagaagctctctgctcaccac
cagggcagcattataataattattgactctgttgaccgaatacagcaagctgaaaagcac
atgaagtggctgatcgaccccctgccagtgaacgtcagggttgtagtgtctgtgaatgtt
gaaacgtgtccccaagcatggaggctatggccaactcttcatcttgatccattaagtata
aaggatgtgaactctctcattaataaagaatgcagctcggcaagtctgaagctgacgaaa
gagcaggagaagaagcttgagaaacactgtcattctagtacaacttgcaatgctctgtac
gtcacgctgttgagtagaatggtggctggcgctggaagtgcagaaaatattgacttaatc
ttgcaaaagtgtctcctgtgccaagatacggtgtcgctgtacaagctagttctgaaatcc
attcatgaatctttgaaaagcgagaaagaccaaggcctcttgaaagagattctttgcctc
atcagcatcagccacaatggagtaagcgaatcggaactgatagaactctgccctgagctc
tcctgggcagtgttagcctctgtagttcacagtctgtataagatgtgctttttaacatac
ggctgtggcttattgaagtttcgtcatctacaggcttgggaaacagtaaagctggaattt
atggaagaagatcacaatgcttttgatgcttgcagaaaaaaactgattgactacttcacc
aagcagctaagtcaagagagagtgacttggagaagtgcagatgaactcccctggctgttc
cagcagcaaggtgacaagcagaagttacaaaagtgcctcttgaatctctttgtatcccag
aatctttataaaaggggccattttgcagaactgttgagctattggcagcttctggggaaa
gataagaactcaatggcagcagagtattttagctctctgaagctgtatgagaaaagttgt
gaaagagaggaaaatatgatctctctagctgatctttatgagactctgggacggtttctt
aaggatctgggccttctcagtcaggctattgctcctttgcagcgctccctggagattcga
gagacagcccttgatccagaccatcctagagtagcccaatctctccatcaattagcagga
gtttatgtgcagtggaagaagtttggtaacgctgagcagttatacaaacaggctcttgaa
atctctgaaaatgcttatggaactgaacatctcagggttgctcgtgaacttgatgctctt
gcaacattgtaccagaaacagaacaagtatgaacaagctgaacatctaaggaaaaaatca
ttcaaaattcaacaaaaagctgtgaggcggaaaggcagcctgtatggatttgctcttctt
cgccaacgagccctgcagctagaggagctcacgctggggaaagacacatcggacaatgct
cgaactctcaatgagcttggtgttctctactaccttcaaaataatcttgagacagcagaa
cttttcttgaaacgctccttggaaatgcgagaacgggttcttgggtctgatcacccagac
tgtgcccagtctttgaataatctagcagctctttacaatgagaagaagcagtatgataaa
gcagaggagctttatgaaaaggcactgagcatccgcaagagagctttggcccctgaccat
ccttctttagcttacacggtgaaacaccttgctgtgctctacaagaagatgggaaagctt
gacaaagccgttcctctgtatgagttagctgttgaaattcggcaaaaatcttttggtcca
aagcacccaagtgtggctactgctttggtaaacttggctgttctttattgccaaatgaaa
aaacatcttgaagctttgcctctttatgaacgggccttgaagatatatgaagacagcttt
ggacgtatgcatcctcgtgtgggagaaacgttaaaaaatttggcagtgttgagctatgaa
ggaggagattttgagaaagctgctgagctttataagagagccatggaaatcaaagaagca
gagacattgttgacaggagggaaagtggcttcccgtcattcatcaagtggagacacgctc
agtgtgaagagtgctttctctccccatgttttcttgcagcaaggacaaagttag
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