Eublepharis macularius (Leopard gecko): 129337631
Help
Entry
129337631 CDS
T09084
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129337631 (VPS50)
Membrane trafficking [BR:
emc04131
]
Protein recycling
Others
EARP complex
129337631 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
129337631
NCBI-ProteinID:
XP_054847471
UniProt:
A0AA97LAD0
LinkDB
All DBs
Position
11:complement(61929265..62054686)
Genome browser
AA seq
966 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQGDIHDLSPLENFRIPSKDELRELREQPTDPQAQQEIINSIEEV
YFSNDSFDVVKYELEKLPSVLSLQELEDYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLMGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMEWHERYDCDESASLSDG
GNMTGSEETNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDMSNFKYDDFIFVLDIIS
RYWLMQVGEEFCGSKSEVLQESVRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSF
SILQLHEFKFMAQSRSPSVSPSKQPLSEIERTLTLFEQYCNGGNPFEIQANNKDDETEDV
LASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDYC
LSKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRND
TFESTGLGLSSSRLRTTLNRIQESLIDVEMSSDATGTLTAAEERKEKVPSPHLSHLVSLT
SGSTLYGLAERVVATESLVFLAEQFEFLQPHLDTVMPPAKKPFLQQFYSQTVSTASELRK
PIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNRRLNEVSRRVR
IPLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIP
DKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDD
IDRPKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgcttatgacccgacagggtctcagaagtcctcagggagatatt
catgatttgagcccacttgagaacttcagaataccaagcaaggatgaacttagagagctt
cgggaacaaccaactgatcctcaggcacagcaagaaataattaacagcattgaagaggtc
tatttttccaatgattcctttgatgttgttaagtatgagttggagaagctgccatctgtg
ctgagtcttcaagaactggaagactacagagacaaattaaagcaacaacaagcagctgta
tctaagaaggtagctgacctgattcttgaaaaacagcctgcatatgtcaaggaacttgaa
cgagtgacatcattacaaactggcctgcagttagctgcagtcatttgcacaaacggaaga
cgacatctgaatattgcgaaggaaggttttactcaagcgagcctgggccttcttgcaaac
caacgaaaacgtcagttgctgatggggctgctcaagtctttgagaacaataaaaaccctg
caacagactgatgtacgcttaagtgaaatgttggaggaggaggattatccaggagctata
caattgtgcctggaatgccagaaagcagctagcactttcaaacactacagttgcataagt
gaattgaattcaaaactgcaggacactttggaacaaattgaggagcagctagatgttgcg
ctttccaaaatctgcaagaactttgatatcaaccactataccaaggttcagcaggcttac
agactactggggaaaacacagacagcgatggaccaactgcatatgcactttactcaggcc
attcacaacacagtattccaagttgttcttgggtatgtagagctgtgtgccggaaacacg
gacaccaaatttcagaagcttcagtacaaagacctctgcacacacattacatcagacagt
tacattccatgccttgctgacctctgcaaagctctgtgggaggtaatgcttagttactat
cgaaccatggagtggcacgagcgatacgattgtgatgagtctgcttcactttctgatgga
ggcaatatgacgggcagtgaagagaccaattttgaccgcagttacgtgaaaaagaaattg
gaacatggactttcacgaatatggcaggatgtacagctgaaagtgaagacctatttgctg
gggacagacatgtctaacttcaaatatgatgacttcatctttgtgctggatattatcagc
aggtattggctgatgcaagttggagaagaattttgtggcagcaagtcagaagttttgcaa
gaatcagttagaaaacaaagtgttaattatttcaagaactatcacagaactcgcctcgaa
gagctgcgaatgttcttggagaacgagacgtgggagctttgccctgttaaatcaagcttc
agcatactgcaacttcatgaatttaagttcatggctcagtcgcgttctccttccgtctca
ccaagcaagcagcctttgtcagaaatagaaagaacccttaccctttttgagcagtattgt
aatggaggaaacccatttgaaatccaagccaacaacaaggatgatgagacggaagacgta
ctggcttcgaatgggtatgaatcggacgagcaagagaagagtgcctatcaagagtacgat
agcgacagtgatgttcctgaagaactgaaaagagattatgttgatgaacagactggagat
gcccctgtgaaaagtgtttctcgagaaaccttgaggagcaggaagcgatcagattattgc
ctcagcaaggtgaatgcacccattttaaccaacactacacttaatgtgataagacttgtt
ggcaaatacatgcagatgatgaacatcttaaaaccaattgcctttgatgtgatccacttc
atgtcccagctttttgactactacttgtatgcaatatatacattttttggccgaaatgac
acatttgaatcaacaggactgggactcagcagcagcagacttcgcaccactctgaacaga
attcaggaaagtctgatcgatgtggagatgtcctccgatgccactggaactcttactgct
gctgaagaaaggaaggagaaagttccaagcccacatctcagtcaccttgtcagtttaaca
tctggtagcactctgtacggcttggcagagagagtggtggccacagaatccttagtattt
ttagctgagcagtttgagttccttcagcctcatctcgatactgtgatgcctccagccaag
aaaccttttcttcaacagttctactctcagacggtgtcaacagccagtgaattgcgtaaa
cctatttactggattgtagctgctaaagcaattgattatgaacagatgctgctccttatg
gccaacgtgaaatgggatgtgaaggaaatcatgtcccaacacaatatttacgtagattcg
cttttaaaggaatttgaacagttcaacaggaggctgaatgaagtgtctaggagagtccgt
attccgttgcccgtgtcaaatattctttgggagcactgtatacgactagccaatcgaact
attgtagaaggttatgctaatgtcaagaagtgcagcaatgagggccgtgccttgatgcaa
ctggacttccagcaatttttaatgaaactggagaagctcacggatattagaccgattcca
gataaggaatttgttgagacctacatcaaagcatattatctgactgaaaatgacatggag
cgctggatcaaggagcatagggaatattctacaaagcaattgaccaatctggtgaatgtt
tgtctgggatcgcacattaacaaaaaagcaagacagaaactcttagcagctattgatgac
atagataggcctaaaagataa
DBGET
integrated database retrieval system
