Eublepharis macularius (Leopard gecko): 129337920
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Entry
129337920 CDS
T09084
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129337920 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129337920 (SMARCD3)
03036 Chromosome and associated proteins [BR:
emc03036
]
129337920 (SMARCD3)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129337920 (SMARCD3)
Chromosome and associated proteins [BR:
emc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129337920 (SMARCD3)
PBAF complex
129337920 (SMARCD3)
GBAF(ncBAF) complex
129337920 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
129337920
NCBI-ProteinID:
XP_054847906
UniProt:
A0AA97LAS5
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Position
11:95724882..95774474
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AA seq
493 aa
AA seq
DB search
MAAEEVTGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGM
PQAVMEPARKRVAPQQAQQQQVQQAAQQAAQQAAQQAQQATQNRPRSAKRRKMADKILPQ
RIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKS
DADDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTP
TTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQY
IKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPS
DQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITALDNKIHETIESINQLKIQRDFML
SFSKDPKGYIQDLLRSQSRDLKVMTDVVGNPEEERRADFYHEPWSQEAVSRYFYCKIQQR
RQELEQSLGVRNT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaggaagtcactggaggggcgcgcaaggcgacgaaaagcaaactttttgag
tttctggtccacggggtgcgtcctgggatgccatctggtgctcgaatgccccaccagggg
gctcccatgggtcccccaggcccaccctacgtggggagcccttctgtgcggcctgggatg
ccccaggctgtgatggaaccagcacgcaagcgggtggccccacagcaggcgcagcagcag
caagtgcagcaggcggcacagcaagcagctcagcaggcggcgcagcaggcgcagcaggca
actcagaatcggcccaggagtgccaagaggaggaaaatggcggacaaaatcctccctcag
aggatccgggagctggtccctgagtcccaggcgtacatggatctcctggcctttgagcgt
aaactggaccaaaccatcatgcggaagcgcgtggacatccaagaggccctgaagagaccc
atgaagcaaaaacgcaagttgcgcctttatatttccaacacattcaatcctgctaaatcg
gatgccgatgactctgacggcagcatcgcctcctgggagttgcgggtggagggcaagctc
ttagatgacctcagcaagcagaagcgaaagttctcttccttcttcaagagtttggtcatt
gagctggacaaggacctgtacggccccgacaaccacctggtggagtggcaccggactccg
accacccaggagacagatggcttccaggtgaaaaggcccggggacgtcagtgtgcgctgc
acgctcctgctcatgctggattaccagcccccacaattcaaacttgacccccgcttggcc
cgcctgctggggatccacacgcagacacgctccgccattatccaggcactgtggcagtac
atcaagacaaacaagctacaggactcccacgacaaggaatacatcaactgtgacaagtat
ttccagcagatctttgactgcccacggctcaagttttctgagatcccacaaagactcact
aacctacttctgccaccagaccccattgtcatcaaccacgtcatcagcgtagaccccagt
gaccagaagaagacggcttgctatgacattgacgtggaggttgaagatcccctgaaaggg
cagatgagcagcttccttctctcaacagcaaatcagcaggagatcacagccctggacaac
aagattcatgagacaatcgaatccatcaaccagctaaagatacagcgagatttcatgttg
agcttctccaaagacccgaaaggatatatccaagatcttctccgatctcagagtagagac
ctgaaggtaatgacggacgttgttgggaatcccgaggaagagcggcgagcggatttctac
catgagccctggtcccaagaggctgtaagcagatacttctattgtaagatccagcaacga
cggcaagagctggaacagtcgcttggggtgcgcaacacataa
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