Eublepharis macularius (Leopard gecko): 129337927
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Entry
129337927 CDS
T09084
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129337927 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emc04147
]
129337927 (COPA)
Membrane trafficking [BR:
emc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129337927 (COPA)
Exosome [BR:
emc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129337927 (COPA)
Exosomal proteins of bladder cancer cells
129337927 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
129337927
NCBI-ProteinID:
XP_054847917
UniProt:
A0AA97K2G5
LinkDB
All DBs
Position
1:complement(230408882..230453488)
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AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAEFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLSSVKISKVKYVIWSADMSHVALLAKHAIMICNRKLDSLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLEEEAASLKETFDP
EKETIPDINPNAQLLQPLAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGDEAVAKGQEEGGGWEVEDDLDLPAELDVPAGPVG
GTEDGFFVPPTKGNSPAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVTTFAPYKQLFL
QTYARGRTTYQALPSLPSMYGYPHRNWKDAGLKNALPAVGMKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEVERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILTACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFRGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaaattcgagaccaagtcggctcgcgtgaaagggcttagctttcaccccaag
aggccctggatcctaacgagcctgcataatggagtgatccaactctgggactatcggatg
tgtacactcattgacaaatttgacgaacacgatggccctgtgagaggcattgatttccac
aaacagcagcctctctttgtgtctggaggagatgactacaagattaaggtctggaattac
aagctgcgtcgctgtctcttcacactattggggcacctggattacattcgcaccaccttc
ttccaccatgaatatccgtggatcctgagtgcatctgatgatcagaccattcgggtttgg
aactggcagtccagaacttgtgtttgtgtgctgaccggacacaaccattatgtcatgtgc
gcggagttccacccttccgaagacctcgtggtatcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctgaggaagaagaatctctctcctggagctgtggagtcagat
gtccgggggatcacgggagtagacctttttggcacaaccgatgcagtagtgaagcatgtc
ctggagggacatgatcgcggagtgaactgggccgctttccaccccaccatgcctctcata
gtgtcaggggctgacgatcggcaggtcaagatatggcggatgaatgaatcaaaagcttgg
gaagtggacacttgccgagggcattacaataatgtctcctgtgccgtgttccatcctcgc
caggaacttatcctcagtaactcagaagacaagagcatccgtgtctgggatatgtccaaa
cgaacgggtgtccagacattccgcagggatcatgatcgcttctgggtgttggcagcgcac
cccaacctcaatctcttcgctgcaggacatgatggcggcatgatcgttttcaagctggaa
cgcgagcggcccgcctacgctgtgcacggcaacatgctctactatgtgaaggaccgcttc
ctccgccagttggacttcaacagctccaaagatgttgccgtgatgcagctgaggagtggc
tccaagtttcccgtgttcaacatgtcatacaacccagctgagaacgctgtcctcctctgc
actagagccagtaatctggagaacagcacttacgacctgtacaccatccccaaggatgca
gattctcagaatcccgacgctcccgaagggaaacgttcctctgggctaacagccgtgtgg
gtggctcggaaccgctttgcggtcttggatcggatgcattcgattctgatcaagaacctg
aagaatgagatcaccaagaaggttcaggttcccaactgtgatgagatcttctatgccggc
accggcaacctgctgctgagggatgccgattccatcactctctttgacgtgcagcagaaa
cggacgctgtcctccgtgaagatctccaaggtgaagtatgtcatctggtcagctgacatg
tcccatgtggcactactagccaagcatgccatcatgatctgcaacaggaagctggactcc
ctttgcaacatccatgagaacatccgggtgaagagcggtgcctgggatgagagcggggtc
ttcatttacacaaccagcaaccacatcaaatatgctgtcaccaccggagatcacgggatc
atccgcaccctagacttgccaatctatgtgacccgggtaaaaggaaacaatgtctactgc
ctggatcgtgaatgcaggccccgtgtcctgaccatcgacccgaccgaattcaagttcaag
ctggcgcttatcaaccggaaatacgatgaggtcctccacatggtgcgcaacgccaagctc
gtgggacagtccatcatagcctacctccagaagaaaggctaccctgaagttgcactgcat
tttgtgaaagacgagaaaactcgcttcagcttggctctcgaatgtggcaacattgagatt
gcgctggaggcagccaaggccctggacgacaagaactgctgggagaagctgggggaagtg
gccttgctgcaggggaaccaccagatcgtggagatgtgctaccagcgcaccaagaacttc
gacaagctctccttcctttacctgatcacaggcaacctggagaagctgcgcaagatgatg
aagatagctgagatccggaaagacatgagtggccattaccagaatgccctgtatctcggg
gatgtagcggagagggtgaggatcctgaagaactgcgggcagaaatccctggcctatctc
acagctgcaacccacggtttggaagaggaagctgcaagcttgaaagagacctttgaccca
gaaaaggaaacgattccggacatcaaccccaatgcccagttgctccagccactggctccc
atcatgcctctggacaccaactggcccctgctcactgtctccaagggtttcttcgaagga
accattgccagcaaaggtaaaggaggggcattggctgccgatatagatatcgacacagtg
ggcaccgaaggctggggagaagacgccgagctgcagctggatgaagacggctttgtggat
gctggggaaggcttcggcgatgaagccgtggctaaaggccaagaagaaggtggcggctgg
gaagtggaagacgacctggatctcccagctgaactggatgtccctgctgggcctgtagga
ggaacagaggatggcttcttcgtaccacccaccaaaggcaacagccccgcacaggtttgg
tgtaacaattcccagctgccagtcgatcacgtcctggctggctctttcgagacagccatg
aggcttctccacgatcaggttggagtgactacttttgccccctacaagcagctcttcctg
cagacctatgcccggggccgcactacataccaagccttgcccagcctcccctccatgtac
gggtaccctcaccgcaactggaaggacgctgggttgaaaaacgccctcccagcggtgggc
atgaagctgaatgacttgatccagcgcctgcagctgtgctaccagctcaccacagctggc
aagtttgaggaggcagttgagaagttccgctccattctcttgagcgtgccgttgttagtg
gtggacaacaaacaagagatcgccgaggctcagcagctgattgccatctgtcgagaatac
attgtggggctgtcgatggaagtagagaggaagaaactgcccaaggagactctggagcag
caaaagcgcatctgtgagatggctgcctacttcacccactccaacctgcagcccgtccac
atgatcctggtcctgcggactgccctgaacctcttcttcaagctcaagaacttcaagacg
gcggccaccttcgctcgccgtctcctggagctcggccccaagcctgaagtagcccagcaa
acccgcaaaatcctaacagcgtgtgagaagaaccccaccgatgcctatcagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcctaccggcccatctaccggggcaag
ccggtggaaaagtgcccactcagcggggcttgttattgtccagagttccgcggccaaatc
tgcagagtcacaactgtgacggagattggcaaagacgtcatcggcttgagaatcagccct
ctgcaattccggtga
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integrated database retrieval system
