KEGG   Eublepharis macularius (Leopard gecko): 129338243
Entry
129338243         CDS       T09084                                 
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:emc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129338243 (SNF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:emc04131]
    129338243 (SNF8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:emc04147]
    129338243 (SNF8)
Membrane trafficking [BR:emc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    129338243 (SNF8)
Exosome [BR:emc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129338243 (SNF8)
SSDB
Motif
Pfam: EAP30 DnaD_N RPA_interact_C EutK_C Sigma70_r1_1 Plasmid_RAQPRD Activator-TraM Prophage_tail_N2 DUF4896 Phage_Mu_Gam DotZ
Other DBs
NCBI-GeneID: 129338243
NCBI-ProteinID: XP_054848285
UniProt: A0AA97L9R4
LinkDB
Position
12:complement(44045145..44059711)
AA seq 259 aa
MMHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDTFKTNLEEFASKHKQEIR
KNPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLI
TLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKVLGNGFGILPVGGTYLIQSVPAELNMD
HTVVIQHAEKKGYVTISEIQSSLKWEAQRAKQVLDHLLKEGMAWLDTQASEEPQYWLPAL
FTELYSQEITPEEAKEALP
NT seq 780 nt   +upstreamnt  +downstreamnt
atgatgcaccgacggggggtcggggctggagccatcgccaaaaagaagctggcagaggcc
aaatacaaggaacgtgggacagttttggcagaagaccaattagctcagatgtccaagcag
ctggacacatttaaaactaaccttgaagagtttgccagcaaacacaaacaagagatccgt
aaaaacccgcagttcagagtccagttccaggacatgtgtgcaacgattggtgtggatcca
ctagcctctggtaaaggtttctggtctgaaatgctaggtgttggcgatttctactacgag
cttggggtccagattattgaagtctgcctggctctgaagcacaggaacggaggattaata
acgctggaggagcttcatcagcaagtgctgaaaggcagaggaaagttcgctcaagatgtc
agccaggacgacctcatccgagcaattaaaaagctgaaagttctagggaatggctttggg
atccttcctgttggtggaacctacttgatccagtctgtgcccgctgaattgaacatggat
cacactgttgtgatacagcatgctgagaaaaaggggtacgtgaccatcagtgaaatccaa
tctagtttgaaatgggaagcgcaacgggccaagcaggtgctggaccacttgttgaaagaa
ggcatggcctggcttgatacacaagcatcagaagaaccacagtattggctccctgccctc
ttcacagagctttactctcaggaaatcacaccagaagaagcaaaagaagctttgccctaa

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