Eublepharis macularius (Leopard gecko): 129338291
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Entry
129338291 CDS
T09084
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03013
Nucleocytoplasmic transport
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129338291 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
129338291 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129338291 (THOC6)
03041 Spliceosome [BR:
emc03041
]
129338291 (THOC6)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129338291 (THOC6)
Spliceosome [BR:
emc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129338291 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_NOL10_N
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_Vps41
DSE1_N
Beta-prop_SPT8
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR54
Beta-prop_DCAF12
GCK
Motif
Other DBs
NCBI-GeneID:
129338291
NCBI-ProteinID:
XP_054848355
UniProt:
A0AA97K215
LinkDB
All DBs
Position
12:complement(63922543..63930129)
Genome browser
AA seq
351 aa
AA seq
DB search
MIEVEGAMGVLRMHSAQPKRSWQLMDIQRSLELLHMTVYSQSVSPCGKYLAAGNNFGEIA
IFSLSAALSSEAKEESKKPVISFAAHDGPIYAMVSTDRQLLSAGNGEVKAWNWSEIVKKG
CKEAWCRRPTYKSSLEVPEINSLQLNLKDNSLLMAGGDCAIHMMDLESGAFTREYRGHTD
YIHCLALRDQLRECLSGSEDGTVRLWDLRAGGQVQCIEVHKYEECSRPQYGKWISCLATD
SDWMVCGGGPALTLWHLRSVTPTTVFPVQQCQQQVMFYQDLILSAGHSPTVNHLQISGEM
KAQIPCIPCCVHSLSINEHSPEHKVLTAAGSSHRIDVFTNFGYRAFSLTFT
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagtggaaggagccatgggtgttctcagaatgcactctgcccagcccaagaga
tcttggcaactgatggatattcagcggtctcttgagctcctgcatatgactgtctactct
cagagtgtctctccttgtggcaagtatttagctgctgggaacaattttggagagattgcc
atattcagcctctcagcagcactgagttcagaggccaaggaagagagcaagaagccggta
atatcctttgcagcccacgatggtcccatctatgccatggtctccacagaccggcagcta
ctgagtgctggtaatggtgaagtcaaggcctggaactggagcgagattgtgaagaagggt
tgcaaagaagcctggtgcaggaggccaacctataagagcagcctggaggtgccagaaatc
aacagccttcaactgaacctcaaggataacagtcttttaatggctgggggagactgtgct
atccacatgatggatctggagtccggagcctttactcgtgaatatcggggccacactgat
tacatccactgcctggctcttcgggatcagcttcgagagtgcctatcagggagtgaagat
ggcaccgtgcgcctttgggatttgcgtgctggaggtcaagtgcaatgcattgaagtgcat
aaatatgaggaatgcagccggccacagtacgggaagtggatcagttgcttggcaacagac
tctgactggatggtgtgtggagggggcccagcactcactctgtggcaccttcggtctgtc
acacccaccactgtctttcccgtgcagcagtgtcagcagcaggtcatgttctaccaggac
ctgatcctctctgctggccacagcccaaccgtcaaccacttgcagataagcggggaaatg
aaggcccagatcccctgcataccctgttgcgtccactcgctttccatcaatgaacactcg
ccagagcacaaggtgctcacagctgctggaagcagccaccggatcgatgtcttcaccaac
ttcggttaccgggccttttcccttaccttcacctag
DBGET
integrated database retrieval system
