Eublepharis macularius (Leopard gecko): 129338507
Help
Entry
129338507 CDS
T09084
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04120
Ubiquitin mediated proteolysis
emc04137
Mitophagy - animal
emc04144
Endocytosis
emc04340
Hedgehog signaling pathway
emc04350
TGF-beta signaling pathway
emc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129338507 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129338507 (SMURF1)
04350 TGF-beta signaling pathway
129338507 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129338507 (SMURF1)
04137 Mitophagy - animal
129338507 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
129338507 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emc04131
]
129338507 (SMURF1)
04121 Ubiquitin system [BR:
emc04121
]
129338507 (SMURF1)
03029 Mitochondrial biogenesis [BR:
emc03029
]
129338507 (SMURF1)
Enzymes [BR:
emc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129338507 (SMURF1)
Membrane trafficking [BR:
emc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129338507 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
129338507 (SMURF1)
Ubiquitin system [BR:
emc04121
]
Ubiquitin ligases (E3)
HECT type E3
129338507 (SMURF1)
Mitochondrial biogenesis [BR:
emc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129338507 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
129338507
NCBI-ProteinID:
XP_054848780
UniProt:
A0AA97LA89
LinkDB
All DBs
Position
12:complement(10996276..11047523)
Genome browser
AA seq
743 aa
AA seq
DB search
MSNAGTRRSGSSIKVRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGFNLFFNCS
LSDQRLDLCKLNPTDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGR
PLSCYMEEPAPYTDSTGAAGGGNCRFVESPSQDQTLQAQRLRAPDVRGHVQTPQNRPHGH
QSPSPDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVR
STVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPNQSLTVQNEGSLEDSEELPAQRY
ERDLVQKLKILRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRG
EEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGR
IMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHT
FCVEHNAFGRILQHELKPNGRNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNEL
IPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCMADSSIVKWFWQAVEAFDEERR
ARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPY
ESYEKLYEKLLTAVEETCGFAVE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcggggacgcgcagaagcggctccagtatcaaagtccgcctcacagtactt
tgtgccaagaatcttgcaaaaaaagatttcttcaggcttcctgacccatttgcaaaggtg
gtagtggatggatctggtcagtgtcactcaaccgacactgtgaagaacacattagatccc
aaatggaaccagcattatgacttatacgttgggaagtcagattcgatcaccatcagtgtc
tggaaccacaagaaaatacacaagaaacagggagctggcttcctggggtgtgtccgtctc
ctttccaatgctatcagcaggctgaaagatactggatttaatctgttttttaattgttca
ctttcagaccagcgtttggatctatgcaaactaaaccccacagatactgatgctgttcga
ggccagatagtagtcagcttacagacgcgggacaggataggcacaggaggatctgttgta
gattgcagggggctgctggagaatgaaggaacggtttatgaagactcgggacctggaagg
ccgctgagctgctacatggaggagccagcaccgtacacggatagtactggggctgctggt
ggagggaactgtcgattcgtggagtcccccagtcaggaccagacattgcaggcacagcgg
ttgcgggctcctgatgtgagaggccatgtacagacaccccagaacaggccgcacggtcat
cagtcaccatcccctgacctgcctgaaggctatgaacaaagaacaactgtacagggacaa
gtttattttttgcatactcaaactggtgttagcacgtggcatgaccccaggataccaaga
gaccttaacagtgtgaattgtgatgaacttggacctctgccgccaggttgggaagttaga
agtacagtgtctggaagaatatattttgtagatcacaataacagaaccactcagttcacg
gacccaagattgcatcacattatgaaccaccagtgccaactgaaagaacccaatcagtct
ttgacagtgcagaatgagggctcattggaagacagcgaggagttgcctgcgcagagatat
gagcgagacttggtgcagaaacttaagattcttcggcatgagctctcccttcagcagccc
caagctggtcattgccgcattgaagtatcaagggaagaaatatttgaggagtcataccgt
cagataatgaagatgaggccaaaagatctgaagaagagactgatggtgaagtttcgaggc
gaagaaggcttggattatggtggagtggccagggagtggctgtacctgctgtgccatgaa
atgttgaacccctattatggtctcttccagtactccactgataacatctacatgctgcaa
ataaatccagactcttctatcaatcccgatcatctgtcttacttccactttgttggtcgg
ataatgggtctggctgtgttccatgggcactacatcaacgggggcttcacagttcctttc
tacaaacagctgctgggcaaacccatccagttatctgacctggaatctgttgatccagaa
ctacacaagagccttgtttggattttagaaaacgatatcactccagttctggaccacact
ttctgcgtggagcacaatgcttttggcaggatcctacagcacgagcttaaaccaaatggc
agaaacattcccgtcacagaggagaacaagaaggaatatgtcaggctgtatgttaattgg
cggttcatgagaggaattgaagcacagttcctggctctccagaaaggttttaacgagctt
attcctcagcacctactgaagccttttgaccagaaagagcttgagctcataataggaggc
ctggataagattgatttgaatgactggaagtccaacacacgcctaaagcactgtatggca
gacagcagtattgtcaagtggttctggcaagcagtggaagccttcgacgaagagagaagg
gcaaggctgctgcagtttgtgacgggttccacgcgggttccgcttcagggcttcaaagct
ttgcaaggttctacaggcgctgcaggacccagactcttcactatccacttgatagatgca
aatacagacaaccttccaaaagctcatacttgctttaaccgaattgacattccgccttat
gagtcctacgagaagctttatgaaaagttactgactgctgtggaagagacatgtgggttt
gcagtggagtga
DBGET
integrated database retrieval system
