Eublepharis macularius (Leopard gecko): 129338708
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Entry
129338708 CDS
T09084
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129338708 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emc03021
]
129338708 (CPSF4)
03019 Messenger RNA biogenesis [BR:
emc03019
]
129338708 (CPSF4)
Transcription machinery [BR:
emc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129338708 (CPSF4)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129338708 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCHC_3
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
129338708
NCBI-ProteinID:
XP_054849114
UniProt:
A0AA97K5W6
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All DBs
Position
12:11207497..11212673
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AA seq
269 aa
AA seq
DB search
MQELIANVDHIKFELEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKSACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPACKFMHPRFELPMGTTEQPP
LPQPTQPQQKQNNNPPLQRSSSLIQLTSQNSSPNQQRTPQVIGVMQSQNNSIGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccaacgtggaccacatcaagttcgagctggagatcgcggtggag
cagcagctcggggcgcagccgctgcccttcccgggcatggacaaatccggggctgctgtc
tgtgaattttttttaaagtctgcctgtggaaaaggaggaatgtgtcccttccggcacatc
agtggtgaaaagacagtggtttgcaagcactggctacgggggctgtgcaagaagggtgac
cagtgtgaattcttgcacgaatatgacatgaccaagatgccagagtgctacttctattca
aaattcggggaatgcagcaacaaagaatgcccattcttgcatattgaccctgagtccaag
atcaaagactgtccttggtatgatcgaggcttttgtaagcatggccccctctgccggcac
aggcacactcggcgtgttatttgtgtgaattatctggtggggttctgtccagaggggcct
gcttgcaaattcatgcaccctagatttgaactccccatgggaaccacagagcagccccca
ctgcctcagccaacacaaccacagcagaagcaaaacaacaacccgccactgcagaggtcg
tcatccctgatccagctaacgagtcagaactcttctcccaaccaacaaaggaccccacaa
gtcattggagtgatgcagtctcaaaacaacagtatcggcaacagaggtcccaggccactg
gagcaggtcacgtgttacaagtgtggtgaaaagggacactatgccaatcgatgcacaaag
ggacatttggcctttcttagtggacagtga
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